Ceratosolen solmsi marchali (fig wasp): 105365567
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Entry
105365567 CDS
T06056
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol04120
Ubiquitin mediated proteolysis
csol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105365567
04120 Ubiquitin mediated proteolysis
105365567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csol04121
]
105365567
Enzymes [BR:
csol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105365567
Ubiquitin system [BR:
csol04121
]
Ubiquitin ligases (E3)
U-box type E3
105365567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Alpha_E3_glycop
Motif
Other DBs
NCBI-GeneID:
105365567
NCBI-ProteinID:
XP_011502068
UniProt:
A0AAJ6YPY4
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MSELHPEEIRRRRLARLVSLDNAPGNGSTNSSDPKTGVLMLQSNSTAGPSGASSLLAATI
SPSPSTDPSMLQLPDNKAPMEIQDNCEKHCNSSGVDIDSGIENMEVEDTDRKEIAPRSRT
SSSTVEVTLEQAHSVISRVLSVSWKTSTGGTIYLPDTAKNITETNSNNFADIINQAIMEV
LFKFANGEDPLKDIAIDISLDCQDSPNDPKASPMLSPVTSNSINPLANQLNASNEDQSTH
SKSLAYLIDSYARVAVEERNHPKRSSVPPLSEVLTNLRAQCVQYASLVLQGHLPGCQQPE
VGAGCRSALLNNMLSQNLPRGFLHELVTRNQGNSEAFERIFTPLLQSLYLAMQRASLVGN
THRRPIEALEELVEIRCGPSGNLRPACRLITSQVQFNPELMTPAVGREIARTSFLGPFFS
VSIFAEEQPKVAEKFFNGNTSTDKSMVLTLQKELESIRISLHKILHAILASNTCRESTLT
YLADILRHNEKRTQIQTEEFSLAGDGFTLNVLSVLQMLSVKIKLDTIDPLYPFHPTALID
IKNETRLKLTSQEVTQWLEDLETSGHNWTKAKFPTQCWFLTLHCHHIALIPALQKYQKKL
RTLRDLQKMIDDLQATESQWKDTMHDMPNKELIKKWKYQLKRLGKAKACADAGLVDPLLL
RRSLHFYTSVAEVMLKLLTGVENVNELAYDNNLSNILNCRSETPKVFTALPEWYIEDIAE
FLLFILQFSPEVVVNNVDTILITWLLVLICAQDCMRNPYLVAKLIEVLFVINASVQGLTE
SLHKQVMAHPLSNLLLASNLMKFYTDVETTGSSSEFYDKFFIRYHISLILKSMWESPVHR
ASIIRESSNGKQFVKFINMLMNDTTFLLDESLESLKRIHEVQEIMSDQSTWASFNQDQQQ
SRTRQLATDERQAKSYLTLAKETVAMFHYLTIQITEPFLRPELSGRLSAMLNFNLQQLCG
PKCKNLKVRKPQKYGWEPRALLGHIVDIYLHLDCHKFAAALASDERSFSKELFAEAASKL
EKSAIKSASEIERFIALSEKAAQIASDNRAREEDYNDAPDEFKDPLMGTLMEEPVKLPSG
IVMDKDVIIRHLLNSATDPFSRQPLSEDMLAPMNELKARISEWKQQKSTSTDIQ
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattacatccagaggagataagacgcaggcgattagctcgcctcgtcagcctt
gacaatgctcctggcaatggatctacaaattccagcgatccaaaaactggagttcttatg
ttgcaaagtaattcgactgctggaccttccggtgcttcctctctactagcagctacaatc
tcaccttcgccttccacggatccgtcaatgctacagcttccagacaataaagcaccaatg
gaaatacaagataattgtgaaaagcactgcaactcgtctggtgttgatatcgactctggt
attgaaaatatggaagtagaggatacggatcgtaaagaaattgcaccaagatctaggacg
agttccagtacagttgaagtaacattggaacaggctcattccgttatatcgcgagtgctt
tccgtctcgtggaaaacgtcgacgggaggtacgatatatcttcccgataccgctaaaaat
ataacagaaacgaacagtaacaatttcgctgacatcattaatcaagcaataatggaagtt
ttattcaaattcgctaatggcgaagatcctttaaaggacatagctatagatatatcttta
gattgtcaagatagtccaaatgatccaaaagctagtccaatgctgagtccggttacaagt
aattcaataaacccattggcaaatcaacttaatgcctctaacgaagatcagtccacgcat
tcaaaaagtctcgcatacttaatagattcctatgccagagtagctgtcgaggaaagaaat
catcccaagcgctcgagcgtgccgccgctgtcggaggtgttaacgaatctccgggcccag
tgcgttcagtacgcgagccttgtgctccaaggtcatctgccaggatgccagcagccggaa
gtcggggccggttgccgatccgccctcctgaacaacatgctctcgcagaacctgccacgg
ggctttctccacgagctcgtcacacgcaaccaaggcaactccgaggccttcgagcgcatc
ttcacgcccctactccagagcctctacctggcgatgcagcgcgcgagcctcgtcggcaac
acccataggcggccgatcgaggccctcgaggagctcgtcgagatacgctgcggtcccagt
ggtaacctccgacccgcgtgccgcctcattaccagccaggtgcagttcaatccggagctt
atgacgcctgcggtcggcagagagatcgccaggacctccttcctcggaccctttttctcc
gtctctatattcgccgaggagcagcccaaggtagcggaaaagttcttcaatggcaacaca
tcgacggacaagtcgatggtcctcaccctgcagaaagagctcgaaagcattcgaatatcg
cttcataagattctacacgccatcctcgctagtaacacgtgtcgcgagtcgactctcaca
tacctagccgacatacttcgccataatgagaagcgcacgcagatacagacggaggagttt
tccctcgctggtgatggctttactctcaacgtactctccgtgctccagatgctctccgta
aaaataaaactcgacacgatagatccgctctatccctttcatccaactgcacttatcgat
atcaagaacgagacaaggctgaagcttacctcgcaggaggtaacgcaatggctggaggat
cttgagacaagcggccataattggacaaaagctaaattcccgacgcaatgttggttcctc
actcttcattgtcatcatatcgcactcataccggcactccagaaatatcagaagaagttg
cgcactctacgcgacctgcagaagatgatcgacgatctgcaggcgactgagtcccagtgg
aaagataccatgcacgacatgccgaacaaggagctgattaagaaatggaagtaccagtta
aagagactaggcaaggctaaggcgtgcgcggatgctggcttggtcgatccccttctgctg
aggaggtcactgcatttctatacctcggtggcagaagtgatgttgaagctcctcaccggc
gtcgaaaacgtcaacgagttggcatacgacaataatctgtcgaatatattaaattgccgt
tccgagacgccgaaagtctttaccgctctgcctgagtggtatatcgaggacatcgccgag
ttcttacttttcatacttcaatttagccctgaggtggttgtaaataacgtcgataccatt
cttattacatggctgctggtgctgatatgtgctcaagattgtatgcgaaatccttatttg
gttgccaaattaatcgaagttctatttgtaataaatgcaagcgttcaggggttgacggag
agtttgcacaagcaagtgatggcgcacccgctctcgaatctccttcttgcttccaacctc
atgaaattttatacggacgtcgaaacgacggggtcatcgtccgagttctatgacaaattc
ttcatacgctaccacatctccctaatcctgaaatcaatgtgggagagcccggtgcacagg
gcctcgataatccgcgagagctcgaacggcaagcaattcgtcaagttcataaacatgctg
atgaacgatacgactttcctgctggacgagtcgctcgaatctcttaaacgtatccacgag
gtgcaggagatcatgtcggatcagtcgacttgggcgtccttcaaccaagatcagcagcaa
tcgcgcacgcgtcaattggcgacggacgagcgtcaggcgaagtcgtaccttaccctcgcc
aaggaaaccgtcgccatgtttcactacctcaccatacagatcaccgagccgttcttgcgt
ccggagctctcgggtcgactcagcgccatgctcaacttcaatttgcagcagctatgcggg
ccaaaatgtaagaatctgaaagtgagaaaaccccaaaaatacggctgggagccaagagca
ttgctggggcacatcgtcgacatttacctgcatctcgattgtcacaagtttgccgctgcc
ttggccagtgacgagaggtccttctcgaaggagttgttcgcggaggcggcgagcaagctc
gagaaatcggccataaagtcggcgtcggagatcgagcgattcatcgccctctcggagaag
gcggcccagatcgccagcgataaccgggcgcgcgaggaggactacaacgacgcgcccgac
gagttcaaggatcccctcatgggtacgctgatggaggaacccgtcaagttgccctcgggc
attgtcatggacaaggacgtcattatacggcatctgctcaacagcgcgaccgatcccttt
agtaggcagcctctcagcgaggatatgcttgcccccatgaacgaattgaaagcaagaata
tcggaatggaagcagcaaaaaagtacatccactgatatacaatag
DBGET
integrated database retrieval system
