Ceratosolen solmsi marchali (fig wasp): 105365780
Help
Entry
105365780 CDS
T06056
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03018
RNA degradation
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105365780
09123 Folding, sorting and degradation
03018 RNA degradation
105365780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105365780
03041 Spliceosome [BR:
csol03041
]
105365780
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105365780
mRNA degradation factors
5'-3' decay
Lsm complex
105365780
Spliceosome [BR:
csol03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105365780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105365780
NCBI-ProteinID:
XP_011502328
UniProt:
A0AAJ6YQH4
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEDVQMKSRGRGEMKMRGGQNQRGSRGGGRGTFGSRGGRGP
VSVGRGGNNPGNKNKKLN
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattatccttattacgtactgctcaaaatcatcctatgttagtagaattgaaa
aatggagaaacttataatggccacttagtcagttgtgataattggatgaatattaattta
cgagaagttatctgtacatcaagagatggggacaaattttggagaatgccagaatgttat
atcagaggaagcacaattaaatatttacggatacctgatgaaattattgatatggtcaaa
gaggatgttcaaatgaaatcaaggggacgaggagaaatgaaaatgagaggtgggcaaaat
caaagaggtagtcgtggaggtggaagaggtacatttggtagtcgaggagggagaggacct
gtatcagtaggtcgaggtggcaacaatccaggaaataaaaataaaaaattaaattag
DBGET
integrated database retrieval system
