Ceratosolen solmsi marchali (fig wasp): 105365875
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Entry
105365875 CDS
T06056
Name
(RefSeq) uncharacterized protein LOC105365875 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105365875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105365875
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105365875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_SPT8
Beta-prop_ACSF4
PT26-6P_helical
WDR54
Motif
Other DBs
NCBI-GeneID:
105365875
NCBI-ProteinID:
XP_011502440
UniProt:
A0AAJ7DZT5
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MSLNTAFTNPPPSISLPNMSVPPPAAPNFSAPPPALTMINTSPNYQSRYPNHREINRGFF
KPFRPYHAPKLISGSQETLQDEFDGKRLRKSVMRKTVDYNSSIIKTLENRIWQRDYRDRR
ALQPDVIYYPDLLPPPSYIDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVI
SGSKDNQQPVKLWDPKSGHSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDLRNL
SQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGAGGIDDHEVADEAAVIP
GMGPEDRINIDGEQEDKHGEIPGLDLDHSIDESKKLASKKVPYSKPIPRNFQAQWNEMEA
EDLEQVEALNAIVNQLIETTPGAVPLNDVTPNAIILYGKMIPVESGSKLAEAISKGADAI
NKLVQSGEIEELRDIIELQEQQEEIEDYLLDDGEIDYSKVPDIDLPAPLASSKFAQNPEL
LKALNRGGKRKFDQLIGWSDGGSIDRMSKIHQPVFSGAFTEDSQTSDSDLKYGSSSSERL
LKDNYTDNYNEDYRRNPLEVVRSNRVEEQDLRLNSSGLGRSTESHEELDLKTNFYDNDFR
LLHNSFSETSTFTQRDEENRLLWDEENRNSRKIDGSSSQGNFDKRDISGNSYNGTSLSHS
TSHHNMQNINPNMPPPGISPYSNLSQHPSKISLHSNIEGPLSQMISHHNIPPPFRPNGPP
PQIPNTFGPTNFRTQQNGNFAPNIHFRQLSLFPTQGHFNNFSGPPPNFRPINSNFDRNSF
GGSNFRGQSPTQQSGGTSNNYNSNFGSFSGKTGPNRNTSIIRTSNDTNRNNFNNRGRGRD
NDQLRGPRGRENY
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaaatacggcttttacaaatcctcctccttctattagtcttccaaatatgtcg
gttccaccaccagcggctcccaatttttctgctccacctccagcattaacaatgataaat
acatcaccaaattatcaatctcgttatcctaatcacagagagataaatcgaggatttttc
aaaccattcagaccatatcatgctcctaaattgatttccggtagtcaagaaactttacaa
gatgaatttgatggcaaaagactacggaaatcagtaatgcgtaaaactgttgattataat
tcatcaattattaagacattagagaatcgaatttggcaacgtgattatagggatagacga
gctcttcaaccagacgttatatattatcccgatcttttacctcctcctagttatattgat
aatccaataaatgcagtgacaactagatttgtaaagactgcaacgaataaaatgcgatgt
cctatattttgtatggcatggacacctgaaggacgacgtctagtaacaggagcttctagt
ggagaatttacattatggaatggtctgacatttaattttgaaactatacttcaagcccat
gatagccctgttagaacaatggtatggtcacataatgaaagctggatggtgactggtgac
catgcaggatatgttaagtattggcaaagtaatatgaataacgttaaaatgtttcaagca
cacaaagaagcaattaggggactaagtttcagtccaacagatcataaattggctacttgc
agtgacgatggtactgtacgaatatgggattttttacgttgccatgaagaacgaattcta
cgaggccatggagctgatgttaaatgtgtccactggcatcctcaaaaaagtcttgttatt
tcgggtagtaaagataaccagcaaccagtaaaactctgggatccaaaaagtggtcattct
ttagctacacttcatgcacacaaatccacagtcatggatgttaagtggaatgaaaatggc
aattggcttgtgacagcatctcgtgatcatttacttaagctttttgatttacgaaattta
agtcaagaagttcaaacatttcgaggacacaagaaggaggcctctagtgttgcatggcat
ccaagtcatgaaggtctattttgtagtggcggaagtgatggagctattctattttggcat
gttggtgcggataaagaggtgggtgcaatagagcaagcgcacgatagtatagtttggact
ttagcttggcatccgcttggtcatatattatgctcaggtagcaatgatcatacctcgaaa
ttttggaccagaaataggcctggtgatttgatgagagataaatataatctcaatacatta
cctgccggagcaggtggaattgatgatcacgaagtcgccgatgaagcagcagttattcct
gggatgggacccgaagatcgaataaatattgatggcgagcaagaggataaacatggtgaa
ataccaggtcttgaccttgatcatagcattgatgagagtaaaaaattagcaagtaaaaaa
gtaccatatagtaaaccaataccgcgcaatttccaagctcagtggaatgaaatggaagct
gaagatttggaacaggttgaggcattaaatgctatagttaatcagttgattgaaacgacg
ccaggtgcagtacctctgaatgacgtaacacctaatgcgattattttatatggaaaaatg
attcctgttgaatctggatctaaattagcagaagctatatccaaaggtgctgacgctata
aataagttggtgcaatctggagaaatcgaagaattacgtgatattatagaattgcaagag
caacaagaagaaattgaagactatcttctagatgatggtgaaattgattattccaaagtt
cctgatattgatttgccagctccattagcaagctcaaaatttgctcaaaatcctgaattg
ctaaaagccttaaatcgaggagggaaacgtaaatttgatcaattaatagggtggagtgat
ggaggttcaattgatagaatgtctaaaattcatcaaccagtttttagtggagcatttaca
gaagattcacagacaagtgatagtgatcttaagtatggaagtagcagctctgagagatta
ttaaaagataattatacagataattataatgaagattacaggagaaatccgttagaagtt
gtaagaagcaatagagttgaagaacaggatttgaggcttaattctagtggattaggaaga
tctactgaatcacatgaagaattagatttaaaaactaatttttatgataacgattttaga
ttattgcataattctttctccgaaacaagcacattcacacagcgagacgaagagaataga
ttgctttgggacgaggagaatcgtaattccagaaaaatagatggtagtagttcccagggt
aattttgataagcgtgatatatcaggaaattcgtataatggaactagtttgtcgcattca
acaagtcatcataatatgcaaaatattaatccaaatatgccaccacctggaatttctcca
tattcaaatctttctcaacatccttccaaaataagtttacattcaaatatagaaggtcct
ttatcccaaatgatatcccatcacaatataccacctccatttcggcctaatggccctccg
ccacaaatacctaatacttttggacctacaaattttaggacccaacaaaatggtaatttt
gctccaaatattcattttcgacaattaagcctttttcccacacaagggcattttaataac
ttttctggaccaccacctaactttagaccaataaattcaaattttgatagaaatagtttt
ggtggatctaactttagaggacaaagtccaactcaacaatctggtggaacttcaaataat
tataattccaattttggaagtttttcaggaaaaactggacctaatcgtaatacttctata
attagaacatcaaatgacactaatcgaaataacttcaataatcgtggtcgtggaagagac
aatgatcaattaagagggcctcgagggcgagaaaattattga
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integrated database retrieval system
