Ceratosolen solmsi marchali (fig wasp): 105366040
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Entry
105366040 CDS
T06056
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105366040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csol03041
]
105366040
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105366040
Spliceosome [BR:
csol03041
]
Complex A
U2 snRNP components
U2 related factors
105366040
Complex B
105366040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105366040
NCBI-ProteinID:
XP_011502687
UniProt:
A0AAJ6YR09
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSATPEKKRRRSRSRDRDRDREKTRHRDRRSRSREKERE
RSDRRERSDRDRDRDRDRKSGDSKEKRLTGSKSSRSGKERSNRSRSREGKDKDKGDNEEL
PFDHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELDATKKDGKSTMLANLQLPTAK
KWSLEDDSDEEPPIVLNKDIKEENVKEENEEEKVEIKKENEEEIDPLDAFMAEVQEEVRK
VNKIDNKAVKPGTNNIVAPSTGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGEN
LHETAAGIANKQKRELAKVDHNATDYIPFTKAFYREVPEIARMTSDEVELYKEELEGIRV
KGKNCPKPIKSWAQCGVSKKELDVLRKLGYDKPTPIQCQAIPAVMSGRDLIGIAKTGSGK
TLAFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGKDSKKFTKSLGLSHVCVYGG
TGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQ
VMRIMENVRPDRQTVLFSATFPRQMEALARRILTKPVEVQVGGRSVVCKDVEQHVVVLDD
DQKFLKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTI
LDFKAGRVKLLVATSVAARGLDVKSLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTF
ITPEQERYSGDILRAYELAGVPVPEPLRLLWEGYKSRQEADGKKVHTGGGFSGKGYKFDE
SEAALANEKKKFQKAALGLQDSDDEDIENDIDQQIETMLQAKKIVHEMPKSAAGATGMAG
AGSQAVPSATEKLELAKKLASKINTAKNLGAEAKGATQQVAEAILKGAGPTNLITAKTVA
EQLAAKLNTKLNYQPREEDLIEGEGEPGEQTFRKYEEELEINDFPQQARWRVTSKEALAQ
ISEYSEAGLTVRGTYIAPGKPPPDGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQ
ASGAHTASRGRYKVL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagtagtgacaaggatagacatcatcgaagaagatctcgttctagatcaaga
tctcgttccgctacaccagaaaaaaagaggagacgttcaaggagcagagatcgagatagg
gacagagaaaagacacgtcatagagatagacgtagtcgttctcgtgaaaaagaaagagaa
agaagtgatcgaagagaacgatctgacagagatagggatcgtgacagagataggaaaagt
ggagacagtaaagaaaagcgtcttacaggctcaaaatcttctcgatctggtaaagaacga
tctaatagatcaaggtcacgagaggggaaagacaaggataaaggtgacaatgaagaatta
ccatttgatcatacaaaacttgataaagaagaagaacagaagcgtttagaattagagatg
cagaaaagaagggaaagaattgaaaggtggagagcagagagaaagaaaaaagaattagat
gccactaaaaaggatggaaagtcaacaatgttagccaatttacagttgcctacagcaaaa
aaatggtctcttgaagatgatagtgacgaggaacctcccattgttttgaataaagacata
aaagaagaaaatgtaaaagaagagaatgaagaggaaaaagttgaaattaaaaaggaaaac
gaagaggaaattgatccattagatgcttttatggcagaagtgcaagaagaagttagaaaa
gtaaacaagattgataataaggctgtgaagccaggtactaataatatagtagccccatca
actggaggtgttgttattgttactggggtagcaaagaaaaaggtacaaaaacaaaaaggc
gaattaattgaacagaatcaagatggtttggaatattcaagtgaagaagaaggagaaaat
cttcacgaaacagctgctggaattgcaaataaacagaagcgtgaattggctaaagttgat
cataatgctacggactatataccatttacaaaggctttttatcgtgaagttcctgaaata
gcacgtatgacatctgacgaagtagaactgtacaaagaggagcttgaaggcattcgcgta
aagggtaagaattgtccaaaacccataaaatcgtgggcgcaatgcggagtttcaaagaag
gagctcgatgtactgcgaaagctcggttatgacaagccgacgcccattcagtgtcaagcg
ataccagcggtgatgtcgggcagggatttaattggtatcgctaagacaggcagcggcaag
acccttgcctttctcttgccgatgtttaggcacatactggatcagccgcctctcgccgac
ggcgatggacccattgccctgattatgacaccaacccgtgaactatgcatgcaaattgga
aaggattcgaagaagtttaccaagagtcttgggctgtcgcatgtctgtgtttatggaggc
accggtatttccgaacaaattgccgagctgaaaaggggtgcagagatcattgtgtgcact
cctggaagaatgatcgacatgttggcggcaaataatggaagagtgacaaatctcaggagg
gttacgtacgttgtactagacgaggccgacagaatgtttgatatgggcttcgaaccgcag
gtcatgcgaataatggagaacgttcgaccggaccggcaaaccgttttattcagtgcgaca
tttccccgacaaatggaggccttggcccgtagaattctcacaaaacctgtggaagtgcaa
gtaggtggtcgatcggtggtgtgcaaagacgtggagcagcacgtggtagtgctcgatgat
gaccagaagtttctgaagctgctagagatactcggtcactatcaggacaagggttcaacg
ataatttttgtggataagcaggagaacgcggatacgctactcaaggaccttatgaaggcc
tcttattcgtgcatgtccttacacgggggcatcgatcagtgtgatagggattcaacgata
ctagactttaaggcggggcgggtaaagcttctggtggcaacgtcagtagctgcaagaggt
ttggacgtgaaaagcctcgtactggtggttaattacgactgtcctaatcattatgaggat
tatgtgcacaggtgtggtcgaactggtagagctggaaataagggttatgcgtacacgttt
atcacaccagagcaagagcgctactcgggcgatatcttacgggcgtatgaactcgcgggt
gtaccggtgccggagccgttgcgtcttctttgggaaggttataagagccgacaggaggct
gatggcaagaaggtccacacgggtggtgggtttagtggcaaaggttacaagtttgatgaa
tctgaggcggctctcgccaatgagaaaaagaaattccagaaggcggctcttggcctccaa
gactcagacgacgaggacatcgagaatgatatcgaccagcaaatcgagacaatgttacag
gccaagaagattgtccacgagatgccaaaatccgcggcaggagcgacaggtatggctgga
gccggcagtcaggcggttcccagtgctacggaaaagctcgaactcgcgaaaaaacttgca
tcgaaaatcaatactgccaagaacctcggtgccgaggctaagggggcgactcagcaagtt
gctgaggcaatccttaagggggccgggccaaccaatttaattacggcaaagacagtggcg
gagcaattagcggccaaactaaacacgaaactaaattaccagccacgggaagaggatttg
atcgagggtgagggagagcccggtgaacagaccttccgcaagtacgaggaggagctcgag
ataaatgatttcccacagcaggcaagatggcgagtaaccagtaaggaggctctcgctcag
atatctgagtactcagaggccggccttacggtacgcggcacttatatagctccgggcaag
ccaccccctgatggcgaacgcaaactttatctagcaatcgagtcgacgagtgagcttgca
gtaagtaaagccaaggctgaagtttccaggctcatcaaggaagaacttataaaactccaa
gcctctggcgcccacactgcttcacgcggacgctataaggttctttaa
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