Ceratosolen solmsi marchali (fig wasp): 105366346
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Entry
105366346 CDS
T06056
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csol03041
]
105366346
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105366346
Spliceosome [BR:
csol03041
]
Complex C
Other components
Complex C specific factors
105366346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_14
ABC_tran
Rad17
AAA_19
nSTAND3
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105366346
NCBI-ProteinID:
XP_011503063
UniProt:
A0AAJ6YRW3
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MNIKPKFLAPGDNSWQEDKVDIDAHVSTQFVYNGNHSLSIDLQRKRLPIYKLRNHIIYSL
EKYQTLVLVGETGCGKSTQIPQYLVEAGWASDDKIIGITEPRRVAATSLANRVADERNCI
LGTDVGYAIRFDDCTDNTTKIKYLTEGILLREMMGDPLLTNYSVIILDEVHERTMLTDII
MGLLKKILRKRKSLRVIVSSATVDAEELRDFFNTNQSSKSRDKDTATILSVAGRLYPIEI
LYTVESLANYVNAVVETAIKINESEGPGDILAFLTGMDEVDRAVSLLAEHAKIVKEGQLK
LMPLPIYGSLPNSEQLKVFWKTSNDSRKVVIATNIAETSITIPNITYVIDCGFVKLPWFD
AETQTNSLIIAPISKASADQRAGRAGRTRSGKAYRLYTEQAFKELIDATPPEMQRSDLAP
AVLQLKALGIDNVLRFSFPSSPPSKSLLSALELLYALGAINDNGELSNPLGLMMAEIPLD
PVFAKCIITSGEMGCSEEITTILAMMQVQNVFIRPNSGQAAIKARIAHRMFEVEEGDLLT
LLNVYTAYEKNKTNHWCQKYFINSKAMKRVTEIRIQMRKLIKKLQIPMKSCSVTVEGILK
CITSGLFPHAAYLHYSGVYKTVRGNKDLYIHPNSCLYTLEQPQWILFGEILQTNKTYMRE
LTVIKPEWLVELAPHFYQKTAID
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaagcccaagtttttagcgccaggtgacaattcttggcaagaagataaagtt
gatattgacgcacatgtgtctacacaatttgtttataatggcaatcattcgttgagtatt
gatttacagcgaaaacgattgccaatatataaattaagaaatcatattatttattcgcta
gagaaatatcaaacactagttctagtcggagaaactggatgtggaaaaagtacacaaata
cctcagtatcttgtggaggctggatgggcatcggacgacaaaattatcggcatcactgag
ccgcgaagggtcgcggctacatccttggcaaatcgcgtcgctgacgagaggaattgtatt
ttaggcaccgatgttggttacgcaatacgcttcgatgactgcacggataacacgacaaaa
atcaagtatctgacggaaggaatactattacgagaaatgatgggtgatccattactcaca
aattatagtgttattatcttagatgaggttcatgaaagaacgatgttaaccgatattata
atgggtcttcttaagaagattttaaggaaacggaagagtttacgggtaatcgtatcgtcg
gcaacggtggacgcggaggaattacgtgacttcttcaacactaatcaaagcagcaaaagc
cgggacaaggatacggcgacaatcctgagcgttgcgggacgtctctatcctatcgagatc
ctctacacggtcgaatcattggccaattatgtaaatgccgtcgtcgagacggctataaag
atcaacgagtccgaggggccaggcgacattctcgctttccttactggcatggacgaagtc
gaccgagctgtttctcttctagcagaacacgccaagatcgtgaaagaaggacaattgaaa
ttgatgcctttgccgatttacggctcattaccgaattccgagcaattgaaagtattttgg
aaaacgtcgaacgacagtcgaaaagtcgttatagccactaatatcgcggaaacttctatt
accatacctaacataacatatgtcatcgattgtggctttgtcaaacttccgtggttcgat
gctgaaacgcaaacaaatagtttaataattgctccgatatccaaagcttcggcggaccaa
agggccggcagagctggaagaacgagatcgggaaaagcgtacaggctttatacggaacaa
gcttttaaagaattgatcgacgcaactcccccagaaatgcaacgctcggatttagctcca
gccgttttgcaactgaaggcattaggtatcgataatgtattgaggttcagttttccatcc
tcaccgccaagtaaaagcttgctttcggcattagaattattatatgccctgggagcaatt
aacgataatggagaattgagtaatcctttgggtttgatgatggcagaaataccgctcgat
ccagtgttcgccaagtgcatcattacgtctggtgaaatgggatgctccgaagagataaca
acgatattggccatgatgcaagttcaaaatgtatttatacgtccaaacagcggacaggct
gcaataaaagctcgtatagctcatcgtatgttcgaagttgaagaaggagacttattgaca
ttactaaatgtttatacggcttatgaaaagaataagaccaatcactggtgtcaaaaatat
tttatcaatagcaaggccatgaagagagtgacggaaattcgaatccagatgagaaaatta
attaaaaaattgcaaatacccatgaaatcctgttcagtaactgtcgaaggcattcttaaa
tgcataacatctggacttttccctcatgctgcttatttacactatagcggagtttataaa
accgttagaggaaacaaagatttatacattcatccaaatagctgtctttatacattggaa
caaccgcaatggattttatttggtgaaattttgcaaacgaataaaacgtatatgagagaa
ttaactgtgattaaacccgaatggctggtggaattggcgcctcatttctatcagaagact
gcaattgattaa
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