Ceratosolen solmsi marchali (fig wasp): 105366740
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Entry
105366740 CDS
T06056
Name
(RefSeq) LOW QUALITY PROTEIN: superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105366740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105366740
03041 Spliceosome [BR:
csol03041
]
105366740
03009 Ribosome biogenesis [BR:
csol03009
]
105366740
03016 Transfer RNA biogenesis [BR:
csol03016
]
105366740
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105366740
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105366740
Spliceosome [BR:
csol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105366740
Complex C
U4/U6.U5 tri-SnRNP related factors
105366740
Ribosome biogenesis [BR:
csol03009
]
Eukaryotic type
Pre-60S particles
Helicases
105366740
Transfer RNA biogenesis [BR:
csol03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105366740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
Prp19
Motif
Other DBs
NCBI-GeneID:
105366740
NCBI-ProteinID:
XP_011503581
UniProt:
A0AAJ7E0V6
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MEDFIDDDLFNVFEEASDVDVKARITNSLKRKNKEINIECPIKKLKCETLLEDANLNEIE
SQIKVHSIDTIESCTHEVAIPSDQEYISLESITNKPAKEYKFVLDPFQKEAILCIENNQS
VLVSAHTSAGXVVLYRYAIACSLRDKQRVIYTTPIKALSNQKYREFYEEFKDVGLITGDV
TINPTASILIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDN
VHYVFLSATIPNARQFVEWVAHLHHQPCHVVYTDYRPTPLQHYIFPIGGDGIHLVVDEYG
QFKEDNFNRAISCLQCDATKSDIKARRGSIYKNNSGQSNIFKIVKMIMERNFAPVIIFSF
SKKDCEVYAMQLAKLDLNTAEEKKLVDEVFNNAMDVLNEDDRRLPQVENVLPLLRRGIGI
HHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGRDFRWITS
GEYIQMSGRAGRRGLDEKGIVILMIDEQVSPSVGKDIVQGKPDPINSAFHLTYNMVLNLL
RVEEINPEYMLERSFYQFQNQAAIPKLFNKVKELQNKFDDIQFEKFSLMSSYHDIRKQLD
CLSGDFRSYLTKPEYLLPFLQPGRMVKVKNEKEIFDWGIIINFKKKTPKNPEKEKTTIIV
DILLNVSKDSTEAIPIPCSKNEEGEVEVIPVLHTLISQISSLRLYYPKDLRSSDNRKSVL
KTIQEVKKRFPDGPPLLNPITDMQIEDTEFKDIIKRIEVLEKRLYDHPMHKDSNLNDFYE
KFLIKEDYGKKLIDAKTELKYAKSVLQMDELKCRKRVLRRLLYCTATDVIELKGRVACEL
NGADELLLTEMLFNGFFKSLTVPQITALISCFVCDDKSSEVPKSIEELSGPLRQMQDTAR
KIAKASRESMLELNEDSYVERLKPFLMDVVYAWCKGATFLQICKMTDIFEGSIIRCMRRL
EEVLRQLLQAVKHMGNTELENKFSEAIKLLKRDIVFAASLYL
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggaagattttatagatgatgatctatttaatgtatttgaagaagctagtgacgttgat
gtaaaagcaaggataacgaatagtttaaaacggaaaaataaggaaattaatatcgaatgc
ccaataaaaaaactaaaatgtgaaacacttttagaagatgctaatttaaatgagattgaa
tctcaaattaaagttcatagtatagatactatagaatcttgtacacatgaagttgcaata
ccatcagatcaagagtatatttcattggaaagtataactaataagccagccaaggaatac
aaatttgttttagatccttttcaaaaagaagcaatattatgtatagaaaataatcagtcg
gttttagtatctgcacatacatcagcaggataagttgtcttgtatagatatgctattgca
tgttctttgcgagataaacaaagagtcatatatacaactcctataaaagcattgagtaac
caaaaatatagagaattttatgaagaatttaaggatgttggtttaattactggagatgta
acgataaatccaactgcaagtattttaataatgactacagaaattttacgaaatatgctt
tacagaggatctgaggtaatgcgagaagttggatgggtaatatttgatgaaattcattat
atgcgtgacaaagaaagaggtgtagtttgggaagaaacgttaattttattaccggataat
gttcactatgtttttttatctgcaactataccaaatgcacgtcaatttgttgaatgggtt
gcacatttacatcatcaaccatgtcatgttgtttatacagattatagaccaacaccttta
caacattatatatttcctattggtggagatggaattcatttggtagtagatgaatatggt
caattcaaagaggataattttaacagagcaatatcatgcttgcaatgtgatgctactaaa
agtgatataaaagcccgtagaggttcaatatataaaaataattctggccaatcaaatatt
tttaaaatagtaaaaatgataatggaaagaaattttgcaccagttataatttttagtttt
tcaaaaaaagattgtgaagtttatgctatgcaacttgctaaattagatcttaacacagct
gaagaaaagaaattagtcgatgaagtatttaataatgcaatggatgttcttaatgaagat
gatagaagattaccacaagttgaaaatgtcttacctttgttgagacgtggaataggtata
catcatggaggactccttccaattctaaaagaaactgtagaaattttatttggtgaaggt
ttaattaaggcattattcgcaacagaaacttttgcaatgggcttaaatatgcctgctaga
actgttttatttactgcaccacgcaaatttgatggaagagattttcggtggattacatcc
ggtgaatatatacaaatgtccggacgtgctggtagaagaggactagatgaaaagggaatt
gttattttgatgattgatgaacaagtgagtccaagcgtaggaaaagatattgtacaagga
aaaccagatccaattaattctgcttttcatttaacttacaatatggttttaaatctttta
agagttgaagaaataaatcctgaatacatgttagaaagaagtttttatcaatttcaaaat
caagcagcaattcccaaattatttaataaggtgaaagaattacaaaataaatttgatgat
attcaatttgaaaaatttagcttaatgtcatcttaccatgatattagaaaacaattagat
tgtctaagtggagactttcgatcatatttaacaaaaccagaatatttacttccttttctt
caacctgggagaatggtaaaagttaaaaatgaaaaagaaatttttgattggggtattata
attaatttcaaaaaaaagactccaaaaaatcctgaaaaagaaaagacaactattattgtt
gatattttacttaatgtttctaaagattctacagaagctattccaataccttgttctaaa
aatgaagaaggagaagtagaagtaattcctgtattacatacactaatttcacaaatcagt
tccctgagattatattatccaaaagatttgagatcgtctgataatagaaagagtgtatta
aaaacgatacaagaagttaaaaaacgatttccagatggacctcctttacttaatcctatt
acagatatgcaaatagaagatactgaatttaaagatataataaaaaggatagaagtttta
gaaaaaaggctgtatgaccatccaatgcataaagattccaacttaaatgatttttatgaa
aagtttttaatcaaagaagattacggtaaaaaattaatagatgctaaaactgaattaaaa
tatgcaaaatctgttttacaaatggatgaattaaaatgtagaaaacgagttttacgtcga
ttactttattgtacagcaacagatgttatagaattaaaagggcgcgttgcttgtgaacta
aatggtgctgatgaactgttattgacagaaatgttatttaatggattttttaaatccttg
actgttcctcaaattactgcattaatcagctgttttgtatgtgatgataaatcaagtgaa
gttcccaaaagcatcgaggaattaagtggaccattaagacaaatgcaagacactgcaagg
aaaatagcaaaagcatctagagaatcaatgctagaattgaatgaagactcatatgtagaa
agattgaaaccatttttaatggatgttgtttatgcatggtgtaaaggcgcaacattttta
caaatttgtaaaatgacagatatatttgaaggttctattattagatgcatgagacgtttg
gaggaagtacttcgacaacttttacaagcagtaaaacatatgggcaacacagaacttgaa
aacaaatttagtgaagcaattaaattacttaaaagggatattgtatttgcagcttcacta
tacttgtaa
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