KEGG   Ceratosolen solmsi marchali (fig wasp): 105367516
Entry
105367516         CDS       T06056                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
csol  Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03030  DNA replication
csol03410  Base excision repair
csol03420  Nucleotide excision repair
csol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105367516
   03410 Base excision repair
    105367516
   03420 Nucleotide excision repair
    105367516
   03430 Mismatch repair
    105367516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csol03032]
    105367516
   03036 Chromosome and associated proteins [BR:csol03036]
    105367516
   03400 DNA repair and recombination proteins [BR:csol03400]
    105367516
DNA replication proteins [BR:csol03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105367516
  DNA Replication Termination Factors
   ELG1-RFC complex
    105367516
Chromosome and associated proteins [BR:csol03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105367516
DNA repair and recombination proteins [BR:csol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105367516
  Check point factors
   HRAD17(Rad24)-RFC complex
    105367516
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 bpMoxR AAA_lid_RFC1 Rad17 AAA_22 AAA_11 DUF815 Mg_chelatase AAA_14 AAA_30 AAA_5 AAA_assoc_2 ATPase_2 AAA_24 SLFN-g3_helicase AAA_19 nSTAND_NTPase5 ResIII RuvB_N DNAX_ATPase_lid Gp44_lid Kinesin AAA_7 nSTAND3 IstB_IS21
Other DBs
NCBI-GeneID: 105367516
NCBI-ProteinID: XP_011504561
UniProt: A0AAJ6YUE8
LinkDB
Position
Unknown
AA seq 358 aa
MNSFLKTGKIGQKETVKVPTTSKAKGTPRQKATPWVEKYRPKTVDEVVEQDEVVEVLRQC
LSGQDFPNLLLYGPPGTGKTSTILAAARQLFGTMYKERILELNASDERGIQVIRDKVKSF
SQLTASHIRSDGKSCPPFKIVILDEADNMTGAAQSALRRTMEKESHTTRFCLICNYISRI
IQPLTSRCTKFRFKPLGEEKIIQRLEYICNEEDLKAEKSVLKTVVDASGGDLRRAITCLQ
SVTRLKGKGIEITIDDVLEISGIVPVKWLDDLLKVCETKNYNEVEAYVDKFMLEAYSASQ
VVDQLNDIIIYSNILTDKQKALIAEKLAICSYRLLEGGSEYVQFMNLCCGIMQAFEIR
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgaattcgtttttgaaaactggcaaaataggccaaaaagaaacggttaaagtaccaact
acgtcgaaggcgaagggcactcctcgtcaaaaagctacaccttgggtcgaaaaatacaga
cctaaaactgtggatgaagtcgttgaacaagatgaagttgtggaagtattgcgacagtgc
ttgtccggtcaggattttccaaatcttttactgtatggaccgccgggtactggtaaaaca
agtacaattttagctgcagctagacagctttttggaactatgtataaggaaaggatattg
gagctgaatgcatcggatgaaagaggaattcaagtaataagagataaagtgaaatcgttc
tctcaacttacggcgagccacatcagatccgacggtaaatcttgtccaccgttcaaaatt
gtaattctggatgaagcagacaatatgacaggggcagcacaatcagctttaaggcgaaca
atggaaaaagaatcgcatacaactcgattttgtcttatttgtaattatatttcccgaatt
attcaacccctaacatctcgttgcacaaaatttagatttaagcctcttggagaagaaaag
attattcagagattggaatatatttgtaacgaagaagatctgaaagcagaaaaaagcgta
cttaaaactgttgtcgatgcatccgggggagatttacggagagcgataacttgcttacaa
tctgttacaaggcttaaaggaaaggggattgaaattactatagatgatgtgctagaaata
tccggtattgttccagtcaagtggctcgatgatttattaaaagtctgcgaaacaaaaaac
tataacgaagtcgaagcttatgttgataaattcatgttagaggcttattcggcaagtcag
gtcgtagatcaattaaacgacattattatttattcaaatatacttacagataagcaaaaa
gctttaatcgcagaaaaacttgcgatatgcagctatagattgctagaaggaggaagtgaa
tatgtacagtttatgaatctttgctgcggtattatgcaggcatttgaaatacgatga

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