Ceratosolen solmsi marchali (fig wasp): 105368228
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Entry
105368228 CDS
T06056
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03430
Mismatch repair
csol03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105368228
03460 Fanconi anemia pathway
105368228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csol03400
]
105368228
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105368228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105368228
NCBI-ProteinID:
XP_011505505
UniProt:
A0AAJ6YW90
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MDESIAITEDSKQISAINKETIHRICSGQVVLNLAIAIKELVENSLDSGATSIEIKLKEY
GKTCISVIDNGSGILEKDFEGLGLKHHTSKLRQFSDLLEVTTFGFRGEALSSLCSLSNLN
IITKHSSTQHGFYLQFDKNGILIKKKEYARQQGTTVTIDNIFKNLPVRFKEFERNIKKEF
TKMIQILYSYCLVSIGVKITCTNTLGNKSANVIVSTNGAKNLLDNITAVFGRKIRETLME
IECQQPDKNTLEEYNLTDQTLVNFTWKCFVSSCSHTSGRSCPDRQFFYVNGRPCDPIKII
KLINHIYHKYNNKQYPFIYLNIELKQNCTDVNVTPDKRTILFTQEQVILATIKSNFERAW
NNIQSTFAIKTLEELNFTVQKRGISDCSEDCLPSKKPFIEGVNTNANHNEQKHLIEDIKT
KINTLQSNEQNISLNKNNLWNVKMTTSIETIKSKMFKLREMQLSKSKTEKRIKYRAQLDS
KSTDIEKELERELTKESFKKMQIIGQFNLGFILVRLDNDIFIIDQHASDEKFRFEKLSAE
TKIKTQKLILPKPLNLAVLNESILIENQHIFADNGFTFCIKEEEDPGHRVELTGIPVSFG
WQFGQEDIEELIFLIREGSVDGNSTKNIPRPSRVREMLASRACRSAIMIGKALNVVDMNR
LIIQMSQMKNPWNCPHGRPTLRHLLSLTLLK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcaatagccataacagaagattcaaaacaaatttctgccattaataaagaa
acaattcatcgaatttgttctggacaagtagtacttaatcttgctattgcaattaaagaa
ttggtagaaaatagtttagatagtggtgcaacgtcaattgaaattaaattaaaagagtat
ggaaaaacttgtatttcagtgattgataatggaagtggaatattagaaaaagattttgaa
ggacttggtttaaagcatcatacatccaaattgagacaattttctgatttattagaagta
acaacatttggttttagaggtgaagcattaagttcactttgctctttatcaaatcttaat
ataattacaaaacactcttcaacacaacatggtttttatttacaatttgataaaaatggt
attttaattaaaaaaaaagaatatgctagacaacagggaacaacagtaactatagataat
atttttaaaaacttacctgttagattcaaagaatttgaaagaaatattaaaaaagaattt
acgaaaatgattcaaattttatatagctattgcttagtttccattggagtaaaaataact
tgtacaaatactttgggaaataaatctgccaatgtcattgtatcgacaaatggagcaaaa
aatttgttagataatatcactgctgtttttggaagaaaaatacgagaaactttaatggaa
attgaatgccaacaaccagataaaaataccttggaagaatataatttaaccgatcaaaca
ttagtaaattttacctggaaatgttttgtgagtagttgtagtcatacttcaggacgatct
tgtcctgatagacagtttttctatgttaatggcagaccttgtgatcctataaaaattatt
aaactaataaatcacatataccataaatataataataaacagtatccatttatatattta
aatattgaattaaaacaaaattgtaccgatgttaatgtaacaccagataaacgaacgatt
ttgtttacacaagaacaagtaattcttgcaactataaagtcaaattttgaaagagcttgg
aataatatacagagcacatttgctataaaaacgttagaagaattaaatttcacagttcag
aaaagaggcatttctgattgttcagaagattgtttaccatcaaaaaaaccattcattgaa
ggagtaaatacaaacgctaatcataatgaacaaaaacatctcatagaagatataaaaact
aaaattaatacattacaatctaatgagcaaaatatttctcttaataaaaataatttatgg
aatgtaaaaatgacaacaagtattgaaactataaaatctaaaatgttcaaattacgcgag
atgcaattatctaaaagtaaaacagaaaaaagaattaaatatagagctcaattagattct
aaatcgacagatattgaaaaagaattagaaagagaattaacaaaagaatcttttaaaaag
atgcaaatcattggtcaatttaatttaggattcattttagtaagactagataatgatatt
tttattattgatcaacatgctagtgatgagaaatttcgttttgagaaattatcagctgaa
acaaaaataaaaactcaaaaacttattttaccaaagcctttaaatttggctgttttaaat
gaaagtattcttatagaaaatcagcatatattcgcagacaatggctttacattttgcata
aaagaagaagaggatcctgggcatagagtagaacttacaggtataccagtcagttttgga
tggcaatttggtcaagaagatatagaagaactaatttttcttatacgagaaggaagtgtt
gatggtaacagtacaaaaaatatacctagacccagtcgagtaagagaaatgctagcttca
agagcatgccgtagtgctattatgattggaaaggccttaaatgtagttgatatgaatcga
ttaataatccaaatgagtcaaatgaaaaatccttggaattgtcctcatggaaggccaaca
cttcgtcacttattatctttgacacttttaaaataa
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