Ceratosolen solmsi marchali (fig wasp): 105368920
Help
Entry
105368920 CDS
T06056
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105368920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105368920
03041 Spliceosome [BR:
csol03041
]
105368920
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105368920
Spliceosome [BR:
csol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105368920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Exo70_N
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
105368920
NCBI-ProteinID:
XP_011506405
UniProt:
A0AAJ6YXZ1
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MGKEKDTQDTTLKTNSSSEIDKETALDMDMYKTIIMFEEEEALERSSENDAESFFDTCNQ
IRNNMSEIAKLKSNNDASTKEDIRELQVDTALAFMELKKLNRMEKFRTKFSRDSLTTAKT
NVDNRHLQLQNLLYEVIHLKKEVLKCLQFKSKDENILLVSEEEFYKEAPESISRLETTQN
DPHQKRLARLEWELTQRKQLALLCDNLSENKKSVAASIESKQSRLDNLAPQLRGILEASK
PLQESLGLPLDKIKLEHEKAALLSPPLYILYAKASAFRDACDTTLVVSVEGDEEEAKRTF
NQDGGQESDSDNEGQSENIPEETPVHKKRHHRISKEARQEEKKLRLLQKHPLSVKIIVSF
KNDTKLKLQFYYFTVLKVITVVSDLLTVNLGGISVGDMLASESVLRELYPGDTGFDSPNP
ANTYQLARQKLGTFSSLSLGIPYKWAQWMAGLHFVPVDAREQKSVIQDNGQDSVESVLKE
IKKRVRARLDLCAEIRQLESGSLSIFTDSIDAIPQKIATILHKFNISSWKNYCNTFNYSE
SHKENFMTSSDIFYEAILRRGSSELVAYIAIKPDYPKVTSVFRIIFNSNISAGVDIHRDI
EREINVMWDKPPTLSAQLQRLRSCFDIYLETESMAPREKIFFHSVRGRTRSRPYKYVEIG
GGIFTHR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaaggatactcaagatacaacattaaaaaccaattcttcttcggagatt
gacaaagaaacggcattagatatggatatgtataagacaataatcatgtttgaggaagaa
gaagctttggagcgatcgtctgagaacgatgctgaaagcttctttgacacttgtaatcaa
atacgtaataatatgagtgaaatagccaagcttaagtctaataacgacgctagcacaaaa
gaagatattagagagttacaggtagatacagccttagcatttatggaattaaagaaactg
aatagaatggaaaaatttagaactaaattctctcgtgattctttaacaactgctaaaact
aacgttgacaatcgacatttgcaattgcaaaatttattatacgaagtaattcatttaaaa
aaagaagtactgaaatgtttacaatttaaatccaaagacgaaaacatattgctggtttca
gaagaagagttctacaaagaagctccagaaagtatttctagattggaaacaacgcaaaat
gatccgcaccaaaaacgattagctagactagagtgggagcttacgcaaaggaagcaatta
gcattattatgtgataacctgagtgaaaataagaaatctgtagctgctagtatcgagtct
aaacagtcacgtttagataatttagctcctcaattacgtggtattttagaggcaagtaaa
ccgttacaagaaagtcttggactaccattggataaaataaaattagagcatgaaaaagct
gcgttattgtcaccgccattatatattttgtatgcaaaagcatctgcatttagagatgct
tgtgatactacattagtcgtttcggtagagggtgacgaggaagaagcaaaacgtactttt
aatcaagatggtggacaagaatctgattcggataacgaaggccaatcggaaaatattcct
gaagaaactcctgtacataaaaaaaggcatcatagaatatcaaaagaagctagacaagag
gaaaaaaaacttcgactgctgcaaaaacatcctcttagcgtgaaaataattgtttcattt
aaaaatgatacgaaattaaaattgcagttttattattttactgtattgaaagtgataaca
gtagtatcggatcttttaactgtaaatttgggtggtattagcgtaggagacatgcttgca
tcggaatctgtgctacgtgaattatatcctggtgacacaggatttgacagtccaaatcct
gcaaatacttatcaactagcaagacagaaacttggcacattttcatcccttagtttaggt
attccatacaaatgggcacaatggatggcaggcttacatttcgttccggttgatgctcgc
gaacaaaaatctgttattcaagataatggacaagatagcgtcgaaagtgtactgaaagaa
ataaagaaacgagtgagagcaagattggatttgtgcgcagaaatacgtcaattggaatcg
ggcagtttatctatattcacagattcgatcgatgccataccacagaaaatagccacaatt
cttcataaatttaatatttcatcgtggaagaattattgtaatacattcaattattcagaa
tcacataaagagaactttatgacatcgtccgatatattttatgaagccattttacgacgt
ggaagtagtgaactagtggcatatattgcaattaagccagactatcccaaagttacatca
gtttttcgaataatttttaattcaaatatatctgccggagtggacattcatcgggacatt
gaacgtgaaatcaacgtaatgtgggataaacctccgacgttgtctgctcaacttcaacga
ctcagatcttgtttcgacatatacttggaaacagaaagtatggcaccacgagaaaaaatt
ttttttcattctgtccgaggcagaactcgctcccgcccttacaaatatgtagaaattggg
ggtggcatattcactcatcgatag
DBGET
integrated database retrieval system
