Cetobacterium somerae: MKD34_02060
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Entry
MKD34_02060 CDS
T08261
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
csom
Cetobacterium somerae
Pathway
csom00470
D-Amino acid metabolism
csom00550
Peptidoglycan biosynthesis
csom01100
Metabolic pathways
csom01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MKD34_02060
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MKD34_02060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MKD34_02060
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csom01011
]
MKD34_02060
Enzymes [BR:
csom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MKD34_02060
Peptidoglycan biosynthesis and degradation proteins [BR:
csom01011
]
Precursor biosynthesis
Amino acid ligase
MKD34_02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
CPSase_L_D2
RimK
ATPgrasp_ST
GARS_A
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
UPO97647
LinkDB
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Position
469306..470166
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AA seq
286 aa
AA seq
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MKIAVVMGGITSEREVSLRSGQAILNSLLRQGYDAYKIDLTKENLVSAFIENDYDLVYLA
LHGEYGEDGRVQSVLDMLGKKYTGSGVTGSAVAMDKILTKIIAKDLGIRIAKTYSSVEEI
DSYPVVIKPAKEGSSVGLYICNTKEEALKAYEVLQNKEPLIEEFIKGDELTAGVLNGEKL
GVVRIKPKSGLYDYESKYTVGKTEYECPAQIDEKAYEEASEAARKIHEKLGLKGVTRSDF
ILKDGKTYFLEVNTCPGMTETSLAPKLATLKGYSFDDLTKIMVESC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatagcagttgttatgggtggaattacatcagaaagagaagtttctttaagaagt
ggtcaagcaattttaaatagtctgttaagacagggatacgatgcctataaaatagactta
acaaaagaaaatttagtatcagcatttattgaaaatgattatgatttagtttatctagct
cttcatggtgaatatggtgaggatggtagagttcagtctgttttagatatgttaggtaaa
aaatatacaggatcaggagtaacaggcagtgctgttgcaatggacaaaattttaacaaag
ataatagctaaagatttaggaataagaatagctaaaacatatagttctgttgaagaaatt
gatagttatcctgttgttataaaaccagcaaaagagggatcaagtgtaggactatatatt
tgtaatacgaaagaagaagccttaaaagcttatgaagtattacaaaataaagaaccttta
atagaagagtttataaaaggtgatgaattaacagcaggagtattaaatggagaaaaatta
ggtgtagttagaataaaaccaaagtctggattatatgactacgaatcaaaatatactgta
gggaaaacagaatatgaatgtcctgctcaaatagatgaaaaagcatacgaagaggcttct
gaagctgctagaaaaattcatgaaaagttaggattaaaaggagtaacaagaagtgatttt
atcttaaaagatggaaaaacttatttcttagaagttaatacttgtcctggaatgacagaa
actagtttagctccaaaactagcaacattaaaaggttattcttttgatgatttaactaag
attatggtagaaagttgttaa
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