Cetobacterium somerae: MKD34_02360
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Entry
MKD34_02360 CDS
T08261
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
csom
Cetobacterium somerae
Pathway
csom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MKD34_02360 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_02360 (xseA)
Enzymes [BR:
csom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MKD34_02360 (xseA)
DNA repair and recombination proteins [BR:
csom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MKD34_02360 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
WbqC
Motif
Other DBs
NCBI-ProteinID:
UPO97703
LinkDB
All DBs
Position
530907..532106
Genome browser
AA seq
399 aa
AA seq
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MEEKIYSVTEFNKMVKGYIDENPNFQEFFLKGELSGVTYYKSGHLYFTLKDKQSQIKCAA
FNYKFKRIAEDLKEGDSVKIFGDVGFYEARGDFQVLVRHVQKEDKLGEMFAKLEKLKKDL
EREGLFSPLFKKVLPKYPKAIGVVTAYTGAAFHDIVNTTRKRFKNIDIYIYSAKVQGVGA
KEEIVKGIETLNKIPEIDLIIAGRGGGSVEDLWAFNEEEVARAFFQSEKPIISAVGHEID
NLLSDLVADVRAATPTQAIEISIPVKKEIEKQLLEKEKRVKDSINRVIKKKKDEIKQLQS
SYVLKNFIKAIEEKNQMLVSKEEKIEDIMKKIFRNKSHELEVCTEKIIALNPLNVLKRGY
SITKIGDKVIKESSQVKLGDSIETTIKNGKIISRIEEII
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaatttatagtgtaacagagtttaataagatggtaaaaggatatatagat
gaaaacccaaactttcaagaattttttttaaaaggagagctttcaggagtaacatattat
aaaagtggtcatttatattttactttaaaagataaacagagtcagataaaatgtgcagca
tttaattataaatttaaaagaatagctgaagatttaaaagagggagattctgtaaagata
tttggagatgttggcttctatgaagctagaggagattttcaggtattggttagacatgta
caaaaagaagataagcttggtgagatgtttgcaaagttagaaaagttaaagaaggattta
gagagggaagggttattttcaccattatttaaaaaagttttacctaaatatccaaaggca
ataggagttgtaacagcatatacaggagcagcatttcatgatatagtaaatacaacaaga
aaaagatttaaaaatatagatatttatatttattcagctaaagttcaaggtgtaggagct
aaagaggaaattgtaaaaggtattgaaacattaaataaaataccggaaatagatttaatt
attgctggtagaggtggaggaagtgttgaagacttgtgggcttttaatgaagaagaagta
gcaagagcattttttcaaagtgaaaaaccaataatatcagctgtaggtcatgagatagat
aatttattatctgatttagtagcagacgttagagcagcgactccaactcaagcaatagaa
atatctattcctgtaaaaaaagagatagaaaagcaattgttagaaaaagaaaaaagagta
aaagatagtatcaatagagtaataaaaaagaaaaaagatgagataaaacagctacaaagt
agttatgtactaaagaattttataaaagctatagaggaaaaaaatcaaatgttagtatca
aaagaagagaaaatcgaagatattatgaaaaagatatttagaaataaaagtcacgagtta
gaagtgtgtacagaaaaaataattgctttaaatcctttaaatgttttaaaaagaggttac
agtataactaaaataggtgataaggtaataaaagaaagttctcaagtaaaacttggagat
tcaattgaaacaactataaaaaatggaaaaataattagtagaatagaggagattatttaa
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