Cetobacterium somerae: MKD34_02375
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Entry
MKD34_02375 CDS
T08261
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csom
Cetobacterium somerae
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csom03032
]
MKD34_02375 (topA)
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_02375 (topA)
Enzymes [BR:
csom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MKD34_02375 (topA)
DNA replication proteins [BR:
csom03032
]
Prokaryotic type
DNA Topoisomerases
MKD34_02375 (topA)
DNA repair and recombination proteins [BR:
csom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MKD34_02375 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UPO97706
LinkDB
All DBs
Position
533902..536160
Genome browser
AA seq
752 aa
AA seq
DB search
MAKKNLVIVESPAKAKTIEKILGNNFHVTASFGHVRDLPKSKIGVDVQDDFKPSYSTIRG
KGDVIKTLKDLAKKSDKVYLASDPDREGEAIAWHIAQTLKLDENEANRIEFNEITNGAIR
EAIKNPRKVDIDRVNAQQARRILDRLVGYEISPLLWKSISSNTSAGRVQSVALKLICDLE
DKIKKFVPEKFWDIKGEFENKMNLSLYKIEGKRFERVTDEDIVKNVQLTLNSEYSVINSK
VTKKSKNPPLPLKTSTLQQLSSSYLGFSASKTMSVAQGLYEGISIDGNQKGLITYMRTDS
TRISDEAKDMAKSYIVENFGKEYLGKEAAKKKKDEKIQDAHEAVRPTDIYLEPDKIKKDL
APDQYKLYKLIWERFMISQLAPMQYEQFEIILENGDYQFRGTLNKIIFDGYYKVFKDEEE
LPLGEFPTINEGDFLKLKKLNIKEDWTKPPSRLTESSLVKKLEADGIGRPSTYASIIETL
KKREYVVIEGKSFIPTELGYEIKTILEKNFKDIMDVKFTASLEDGLDLVEEGERDWIEIL
KDFYSKLSKDLELYKIKVEEESNRIITSDVPCPCGSGNMIMKNGRFGRYLCCTDENCKEK
YSLKGIEIPLEDIKNGDIKVKELLEEQLRVKQGKLTDVFLNNGSRLLLKLGRFGSYLESE
NFKEDNERVSLPGEVKKLLMNGTIEEKDGIVQLKWIMDKIQKEEEEILKNAGNCEKCGKP
FKIGRGRWGKFLACTGYPDCKNIKKLEKDKKE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaaaaaatttagtaatagtggaatcacctgcaaaagcgaagactattgaaaaa
atattggggaataattttcatgttacagcttcctttggacatgtaagagatttgcctaaa
agcaaaattggagtagatgtgcaagatgatttcaaaccgagctattcgacaataagagga
aagggagatgtaataaaaactttaaaagatcttgctaaaaaatcagataaagtatattta
gcatctgaccctgatagagaaggagaggctattgcgtggcatatagctcaaacattaaaa
ttagacgaaaatgaagctaatagaatagaatttaacgaaataacgaatggagcaataaga
gaagctataaaaaatcctagaaaggtagatatagatagagttaatgcacagcaagcaaga
agaatacttgatagactagtaggatatgagataagtcctcttctatggaaatctatatct
tctaatacaagtgctggaagagttcaatcagttgctttaaaattaatatgtgacttagaa
gataaaataaagaaatttgtcccagaaaaattttgggatataaaaggtgaatttgaaaat
aagatgaatctttctctgtataaaatagaaggaaaaagatttgaaagagttacagatgag
gatattgtaaaaaatgttcaattaacactgaattcagaatattcggttattaattctaaa
gtaactaaaaaatctaaaaatccaccgctaccattaaaaacgagtacattacagcaatta
tcatcatcatatttaggtttttcagcttcaaaaactatgtctgtagctcagggattatat
gagggtataagtatagatggaaaccaaaaaggtttaataacttatatgagaactgattca
actagaatatcagatgaagctaaagatatggcaaaaagttatatagtagagaactttgga
aaagaatatttaggtaaagaggcagcgaagaagaaaaaagatgaaaaaattcaagatgcc
catgaagctgttagaccaacagatatatatttagaaccagataaaataaaaaaggattta
gctccagatcaatataagctatataagcttatatgggaaagatttatgatatctcagtta
gcaccaatgcaatatgaacaatttgagataattttagaaaatggagattatcaatttaga
ggtactttgaataagataatatttgatggttattataaagttttcaaagatgaagaggaa
ttaccattaggagaatttccaacaataaatgaaggagatttcttaaaactaaaaaaattg
aatataaaagaggattggacaaaacctccttcaaggttaacagaatcatctttagttaag
aaactagaagctgacggaataggaagaccgtcaacatatgcttcaataatagaaacttta
aaaaagagagaatacgttgtaattgaaggaaaaagttttattccgacagagttaggttat
gagataaaaacaattctagaaaaaaactttaaagatataatggatgttaaatttacagca
tcattggaagatgggttagatttagttgaagaaggagagagagattggattgagatatta
aaagatttctactcgaaactttcaaaagatttagaactttataaaattaaggttgaagaa
gaatctaatagaataataacttcagatgttccttgtccttgtggatctggaaatatgatt
atgaaaaatggaagatttggaagatacctatgctgtactgatgaaaattgcaaagaaaaa
tactctttaaaagggattgaaattccattagaagatattaagaatggagatataaaagta
aaagagttattagaagagcaattgagagttaaacaaggaaaattaacagatgtattttta
aataatggaagtagattgcttttaaagctaggacgttttggtagttatttagagagcgaa
aattttaaagaggataatgaaagagtttctttaccaggagaagttaaaaaacttcttatg
aatggaacaattgaagaaaaagatggaatagtccaattaaaatggattatggataaaatt
caaaaagaagaagaagagattctaaaaaatgctgggaattgtgaaaagtgtggaaaacca
tttaaaataggtagaggaagatgggggaaattcttagcttgtacgggatatcctgattgt
aaaaatataaaaaaattggaaaaagataaaaaagagtag
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