Cetobacterium somerae: MKD34_03005
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Entry
MKD34_03005 CDS
T08261
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csom
Cetobacterium somerae
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csom03016
]
MKD34_03005 (truB)
Enzymes [BR:
csom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MKD34_03005 (truB)
Transfer RNA biogenesis [BR:
csom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MKD34_03005 (truB)
Prokaryotic type
MKD34_03005 (truB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
MRVI1
Motif
Other DBs
NCBI-ProteinID:
UPO97820
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All DBs
Position
677977..678834
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AA seq
285 aa
AA seq
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MEGIIVVDKPIGITSFDVIRVLRRNLKERRIGHTGTLDPLATGILVICVGKATKLAQDIE
GYEKEYVADLELGFKTDTYDIEGKVLAKVEEFNISYENFEETLQTFKGDIKQIPPMYSAI
KVDGKKLYELAREGVEIERKARDVSIKNLETISFDGVKAKIDCTVSKGTYIRSLIYDLGE
KLGTFATMTGLRRTRVGEEDLVRAFTLETIEKMVSENDFSFLVSIEDYFKFPKVDIEDEN
DLKLFVNGQRCKKRINEGKYRVYSKNNFIGLGEVTKGLLKGYKYY
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggaataatagttgtagataaacctatcggtataacttcctttgatgttataagg
gttttaagaagaaatttaaaagaaagaagaataggacatacaggaactttggatccttta
gcaactggaattctagttatttgtgtagggaaagctacaaaattagcacaggatatagaa
ggatatgaaaaagaatatgttgcagatttagaacttggttttaaaacagatacctatgat
atagagggaaaagttttagctaaagtagaagaatttaatatttcttatgaaaattttgaa
gaaacattacaaacatttaaaggagatataaagcaaataccaccaatgtattctgctata
aaagtggatggaaagaagctttatgagttagcaagagaaggtgtagagattgagagaaag
gctagagatgttagtataaaaaatctagagactatatcttttgatggagtaaaggctaaa
attgattgtacagtttcaaaagggacatatattagaagtctaatttatgatttaggtgag
aaattaggaacttttgcaacaatgactggtttaagaagaactagggttggagaagaggat
ttagtaagagcattcacgttagaaactattgaaaaaatggtatcagagaatgatttttct
ttcttagtttcaatagaggattattttaaatttcctaaagtagatattgaagatgaaaat
gatttaaaactttttgttaatggccaaagatgtaaaaaaagaataaatgaaggaaaatac
agagtttattctaagaataattttataggcttaggtgaggttacaaaaggattattaaaa
ggttacaaatattattaa
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