KEGG   Cetobacterium somerae: MKD34_03005
Entry
MKD34_03005       CDS       T08261                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
csom  Cetobacterium somerae
Brite
KEGG Orthology (KO) [BR:csom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csom03016]
    MKD34_03005 (truB)
Enzymes [BR:csom01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     MKD34_03005 (truB)
Transfer RNA biogenesis [BR:csom03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MKD34_03005 (truB)
 Prokaryotic type
    MKD34_03005 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PseudoU_synth_2 MRVI1
Other DBs
NCBI-ProteinID: UPO97820
LinkDB
Position
677977..678834
AA seq 285 aa
MEGIIVVDKPIGITSFDVIRVLRRNLKERRIGHTGTLDPLATGILVICVGKATKLAQDIE
GYEKEYVADLELGFKTDTYDIEGKVLAKVEEFNISYENFEETLQTFKGDIKQIPPMYSAI
KVDGKKLYELAREGVEIERKARDVSIKNLETISFDGVKAKIDCTVSKGTYIRSLIYDLGE
KLGTFATMTGLRRTRVGEEDLVRAFTLETIEKMVSENDFSFLVSIEDYFKFPKVDIEDEN
DLKLFVNGQRCKKRINEGKYRVYSKNNFIGLGEVTKGLLKGYKYY
NT seq 858 nt   +upstreamnt  +downstreamnt
ttggaaggaataatagttgtagataaacctatcggtataacttcctttgatgttataagg
gttttaagaagaaatttaaaagaaagaagaataggacatacaggaactttggatccttta
gcaactggaattctagttatttgtgtagggaaagctacaaaattagcacaggatatagaa
ggatatgaaaaagaatatgttgcagatttagaacttggttttaaaacagatacctatgat
atagagggaaaagttttagctaaagtagaagaatttaatatttcttatgaaaattttgaa
gaaacattacaaacatttaaaggagatataaagcaaataccaccaatgtattctgctata
aaagtggatggaaagaagctttatgagttagcaagagaaggtgtagagattgagagaaag
gctagagatgttagtataaaaaatctagagactatatcttttgatggagtaaaggctaaa
attgattgtacagtttcaaaagggacatatattagaagtctaatttatgatttaggtgag
aaattaggaacttttgcaacaatgactggtttaagaagaactagggttggagaagaggat
ttagtaagagcattcacgttagaaactattgaaaaaatggtatcagagaatgatttttct
ttcttagtttcaatagaggattattttaaatttcctaaagtagatattgaagatgaaaat
gatttaaaactttttgttaatggccaaagatgtaaaaaaagaataaatgaaggaaaatac
agagtttattctaagaataattttataggcttaggtgaggttacaaaaggattattaaaa
ggttacaaatattattaa

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