KEGG   Cetobacterium somerae: MKD34_05040
Entry
MKD34_05040       CDS       T08261                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
csom  Cetobacterium somerae
Brite
KEGG Orthology (KO) [BR:csom00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:csom02048]
    MKD34_05040
Enzymes [BR:csom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     MKD34_05040
Prokaryotic defense system [BR:csom02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   MKD34_05040
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD SNF2-rel_dom CLP1_P Chp1_domII Syntaxin_2
Other DBs
NCBI-ProteinID: UPO96533
LinkDB
Position
complement(1115422..1118616)
AA seq 1064 aa
MFQELKRKNSNRRGIKIYTSELYDQKKVVELLTNMGYRYISEDECIKIRKNKLKDVLLKG
ILTENLKKINSYEYKGIKYKFSEKNIEEAIEKLDISLEKGLMSANAEITDFLYYGTTLEE
KLNDGTKKNFSFKYIDWKDFGENSFYFTEEFEVEKMDLNGKEKHKRPDIVIFINGIPLAS
IELKKSSVAAEEGISQTIRNQREDNIPHFFKFAQLLMAGNTHEFRYGTTGTPARFWAVWN
EEEDLEKELKNLIKDRMINRLDQNIYSLLKKDRFIDLLYQYTLFDNRVKKVARYQQYYAI
KKTLKRIEKTDSDGSRHGGLIWHTQGSGKSLTMVMLAKAIQRKIHNAKIIIVTDRKALDQ
QIKDTFKATEVDVVKASSGSELSKLLRSDRSAVITTVVNKFESVANENIVLNNSNIFILV
DESHRTQYGALNAKMKKTFPLGCFIGLTGTPLMKKEKNSMDKFGGMIHKYTIDSAVKDKA
VLPLLYDGRLVEQNITNENALNRRFDILAKGLNEEQREDLKKKWSRFKEVASSETRLWEI
AMDINEHYKNNWKNTGFKAMFATSSKYEAVKYHQIFQQIGEINTAFIISPPDDREGNEEI
EDENKSLVVNEWKKIINNYGDEERYETAMKDEFKSDHGIEILIVVDKLLTGFDIPRATTL
YLDKELKDHTLLQAIARVNRLFDEKDYGYIIDYRGLLGNLDRALTTYSTFQNFDEEDISG
SLIDIKEEISRVKSYYSHLQEFFMKIKNKSDREEYEVYLEDNKLRKEFYDLLKEYSKALK
YSLSSEKVYDYLGDDLERYKKALKFYNDLRASIRIRYHEAIDFGKFEKEMQKMLDTFIDA
TGVNKLSKVVDIFNVEFAKEVERLEGKRAKADTIRSAVSKTISKKYEENPALYKPLADKI
KKTLEEYKSKRISEEDYLKSMEEILDILKNGASLKKESYPKLIKDNFRAQKIYENLKMLI
GDQLIGVNDISYNTNLSENSVDKFEVMEDVAYNNTMLLSQLAIDFDKVFLETCKVDWAKN
PTLHNKLHQELEDLLWDLEDSCSGIEFDNDTIIEKVIMVAHSMY
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgtttcaagaattgaagagaaaaaatagtaacaggagggggattaaaatttatacttca
gaattatatgatcagaaaaaggtagtagaacttcttacaaatatgggatatagatatatt
tcagaagatgagtgtattaagataagaaaaaataaattgaaggatgttctgcttaaaggt
atcttaacagagaatctaaaaaaaataaactcttatgaatataagggtattaaatataaa
tttagcgaaaagaatatagaagaggctatagaaaaattagatatttctttagaaaaaggt
cttatgagtgccaatgcagagattacagattttttatactatggtactacacttgaggaa
aaacttaatgatggtactaaaaaaaatttttcttttaaatatatagattggaaagatttt
ggggaaaatagtttttattttacagaagagtttgaagtagaaaaaatggatcttaatgga
aaagaaaaacataaaagacctgatatcgtgatttttataaatggaattcctttagcttca
atagaacttaaaaagtcatcggtagcagcggaagagggaatatctcagacaattagaaat
caaagagaagataacatacctcattttttcaaatttgctcaacttttaatggcggggaat
acccatgagtttagatatggaactacgggaactcctgctagattttgggcagtttggaat
gaagaggaagatttagaaaaggaattaaaaaatcttataaaagatagaatgataaataga
ttagatcagaatatttattctcttttaaaaaaagataggtttatagatttactatatcaa
tatacactttttgataatagagtaaaaaaagttgcgagatatcagcaatactacgcaata
aagaaaactcttaaaagaatagagaaaacagattcagatggctctagacatggtggacta
atttggcatactcaaggaagtgggaaatctttaacaatggttatgctagcaaaggctatt
caaagaaaaattcataacgctaagataattatagttacggatagaaaagcactagatcag
caaataaaagatacatttaaagctacagaagtggatgtagtaaaagcaagtagtggtagt
gaactatctaaattacttagaagcgatagatcagcagttattacaactgttgtaaataaa
tttgaaagtgtagctaatgaaaatattgtgttgaataattcaaatatttttatattggta
gatgaatctcatagaactcaatacggtgctttaaatgctaagatgaagaagacattccca
ttgggatgttttataggattaacaggaacccctttaatgaaaaaagagaaaaactctatg
gataagtttggaggaatgattcataaatatactattgatagtgctgtcaaggataaggca
gttttaccacttctttatgacggaagactcgtggaacagaatataactaatgagaatgca
ttaaatagaagatttgatatattggccaaaggattaaatgaagagcaaagagaggatctg
aagaaaaagtggtctaggtttaaagaagttgcttcaagtgagacaagactttgggaaatt
gcaatggatataaatgaacattataaaaataactggaaaaatacagggtttaaagctatg
tttgcaacgagctctaaatatgaagctgtaaaatatcatcaaatatttcaacagatagga
gaaataaatacagcttttataatctctccaccagatgatagagagggaaatgaagaaata
gaagatgaaaataaatcgcttgtagttaatgagtggaaaaaaattatcaacaactatggt
gatgaggaaagatatgaaacggcaatgaaagatgagtttaaatcagatcatggaatagaa
atattaattgttgttgataaactacttactggttttgacattccaagagcgacaactttg
tatcttgataaagagttaaaagatcatacattactgcaagctatagccagagtaaataga
ctttttgatgaaaaagattatggatatataatagattacaggggacttcttggaaatcta
gatagagcacttacaacatatagtacttttcaaaattttgatgaagaggatataagtggt
tctttaatagatataaaagaggaaataagtagagtaaaaagttactattcacatctgcaa
gaattttttatgaaaataaagaataaaagtgatagagaggaatatgaggtttatttagag
gataataaattgagaaaagagttttacgatcttttaaaagaatattcaaaagctttaaaa
tattctttatcttcagaaaaggtttatgattatttaggtgatgatttagaacgatataaa
aaagccttgaaattttataatgatttaagagcatctataagaattaggtatcatgaagct
attgattttggtaaatttgaaaaagagatgcaaaaaatgttagatacttttatagatgca
acaggagttaataaattatcaaaagttgtggatatttttaatgtggaatttgctaaagag
gtagaaagattagaaggaaagagagcaaaagcagatactataagaagtgctgtttcaaaa
actataagtaaaaaatatgaagaaaatccagctttatataaaccattagctgataaaatt
aaaaaaactttagaagaatataaatcgaaaagaatttctgaagaggattatttgaaatca
atggaagagattttagatattttaaagaatggagctagtctaaaaaaagaaagttaccct
aaacttataaaagataattttagagctcaaaaaatttatgaaaacttaaaaatgcttata
ggtgatcaattaataggagtgaatgatatttcatataacacaaatctttctgaaaatagt
gttgacaagtttgaagttatggaagatgtggcttataataatacgatgttactttcgcaa
ttagcaattgattttgataaagtatttttagaaacttgcaaagttgattgggcaaaaaat
ccaacactacataataagttacaccaagagttagaagatttactttgggatttagaggat
agctgttctggtatagaatttgataatgatactattattgaaaaagtaataatggtagct
catagtatgtactaa

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