Cetobacterium somerae: MKD34_06275
Help
Entry
MKD34_06275 CDS
T08261
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csom
Cetobacterium somerae
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_06275
Enzymes [BR:
csom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MKD34_06275
DNA repair and recombination proteins [BR:
csom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MKD34_06275
Prokaryotic type
MKD34_06275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
OspG_kinase
Motif
Other DBs
NCBI-ProteinID:
UPO96769
LinkDB
All DBs
Position
complement(1370929..1372269)
Genome browser
AA seq
446 aa
AA seq
DB search
MSLFKDSRIKYLKNNKKVEGQHIIYWMQESQRTRYNFALNEAIYLSKKNKIPLYVVFNYL
NSYPEASKRHYDFMLQGLKDVKESLDQKGIKFILLEGDPLENIIKVCKKAKVVIWDKSYL
KNQREVKERLLKCIDSTILEIESNVVIPVELVSTKEEYSAKTLRDKYRKIETFNEETFNE
EKYFFIENLGNVLEELDCSDKYIPKIKKTLDGGFLGGEREAVKILESFIKNDLKFYLNKG
PDNERSSKLSPYLHFGQISPVEIKHNIEKLSKELINEKNSFLEEVIIRRELAINFVYYNK
NYDNWLGITYEWAYKTLEKHENDKREYIYSEKELEEFKTHDKYWNACQKQMLDMGYMDSY
MRMYWCKKILEWSVTPQKAYEIAIKLNNKYFYDGRDPNSYAGVAWCFGKHDRAWKEREIF
GKVRYMNSDGLKRKFDIEKYVEKYLK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttaaagattcaagaataaaatatttaaaaaataataagaaagtagaagga
caacatataatatattggatgcaagaaagtcaaagaacgagatataattttgctttaaat
gaagcaatatatttatctaaaaaaaataaaatacctctttatgttgtatttaattattta
aatagttatcctgaagcatctaaaagacattacgattttatgctacaaggtttaaaagat
gttaaagaatctcttgatcaaaaaggtatcaagtttattttattagaaggagatccttta
gaaaatataattaaagtttgtaaaaaagcaaaagttgttatttgggataaaagttatttg
aaaaatcaaagggaagtaaaagagagattgctaaaatgtatagatagtacaattttagag
attgaaagtaatgttgtcattcctgtggagttggttagtactaaagaggagtacagtgca
aaaactttaagagataaatatagaaaaatagaaacttttaacgaagaaacttttaatgaa
gaaaaatatttttttatagaaaatttgggtaatgttctagaggagttagactgttctgat
aaatatataccaaagataaaaaaaactttagatggaggttttttaggaggggagagagaa
gctgtaaaaattttagaaagttttataaaaaatgatttaaaattttatttaaataaagga
cctgataatgaaagaagttcaaaattatcaccctatttacattttgggcaaatatctcct
gtagaaattaaacataatattgaaaaattaagtaaagaattgattaatgaaaaaaatagt
tttttagaagaagttataataagaagggaattagcaattaattttgtctactataataaa
aattatgataattggctaggaataacatatgagtgggcttataaaacattagaaaaacat
gaaaatgataaaagagaatatatttatagtgaaaaagagttggaagagtttaaaacacac
gataaatattggaatgcgtgtcaaaagcagatgttagatatgggatatatggatagttat
atgaggatgtactggtgtaaaaaaatattagaatggagtgttactccccaaaaagcatat
gaaatagcaataaagcttaataataaatacttttatgatggaagagatcctaactcttat
gcaggagttgcttggtgttttggaaagcatgatcgagcatggaaagagagggagatattt
ggtaaagttagatatatgaatagcgatggattgaaaagaaagtttgatatagaaaaatat
gtagaaaaatatttaaaataa
DBGET
integrated database retrieval system
