Cetobacterium somerae: MKD34_07010
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Entry
MKD34_07010 CDS
T08261
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
csom
Cetobacterium somerae
Pathway
csom02024
Quorum sensing
csom03060
Protein export
csom03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MKD34_07010 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MKD34_07010 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MKD34_07010 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csom02044
]
MKD34_07010 (ffh)
Enzymes [BR:
csom01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MKD34_07010 (ffh)
Secretion system [BR:
csom02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MKD34_07010 (ffh)
Eukaryotic Sec-SRP protein
MKD34_07010 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
CLP1_P
APS_kinase
AAA_33
nSTAND3
ATP_bind_1
6PF2K
TsaE
AAA_16
ParA
KAP_NTPase
ABC_tran
cobW
MobB
NPHP3_N
MeaB
MraZ
TIP49
SRPRB
AAA_30
Thymidylate_kin
KTI12
AAA_18
AAA_24
RMNT_CmcI
VirC1
NACHT
AAA_31
AAA_14
Prefoldin
DO-GTPase1
AAA_19
Sigma54_activ_2
AAA_17
ResIII
Motif
Other DBs
NCBI-ProteinID:
UPO96895
LinkDB
All DBs
Position
complement(1523621..1524964)
Genome browser
AA seq
447 aa
AA seq
DB search
MLENLGNRFQDIMKKVRGHGKLSESNIKEALREVRMSLLEADVNYKVVKDFVAKIQEKAI
GAEVLTGINPGQQFIKIVNDELVELLGGTNSRLTKSAKNPTVVMLAGLQGAGKTTFAGKL
AKYLKKQGEKPYLIGADIYRPAAMKQLEVLAQQVGVDVYFELGSNDAVGICERGLEKAKE
AGATYLIIDTAGRLHIDEKLMEELKEVKKVVRPQEILLVVDAMIGQDAVNLAQSFNNALS
IDGVVLTKFDGDTRGGAALSVKSVVGKPIKFVGMGEKLDDLELFHPERLASRILGMGDVV
SLVEKAQEAIGEEDAKSLEEKIRTQKFDLDDFLKQLQNIKKLGSLGNILKMIPGMGQIGD
LAPAEKEMKKVEAIIQSMTREERKKPEILKASRKLRIAKGSGTEVADINKLLKQFEQMRE
MMKMFSTGKFPQLPGMGGRKGGMKFPF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaatttaggaaatagattccaagacataatgaaaaaagtaagaggtcatgga
aaactaagcgaaagtaatataaaagaggctttacgtgaagttagaatgtctttactagag
gccgatgtaaactacaaagttgttaaagattttgttgcaaagattcaagaaaaagctatt
ggagctgaagttttaactggaattaatccagggcagcaatttataaaaatagtaaatgat
gagttggtagagttattaggtggtacaaactctagacttacaaaaagtgctaaaaatcct
acagtagtaatgcttgcgggacttcaaggtgctggaaaaacaacttttgcaggtaaatta
gcaaaatacttaaaaaaacaaggtgaaaagccatacttaataggagcggacatttataga
cctgctgctatgaagcaattggaggttttagcacaacaagttggtgttgatgtttacttt
gaacttggaagtaatgatgctgttggaatttgtgaaagaggtttagaaaaagcaaaagaa
gctggagcaacatatttaattatagatactgctggaagattacatatagatgaaaaatta
atggaagagttaaaagaggttaaaaaagttgtgagacctcaagaaattctgctagtagtt
gatgcgatgataggacaagatgcagtaaatcttgctcagtcatttaataatgcattaagt
attgatggagttgtacttacaaaatttgatggggatactagaggtggagcagctttatct
gttaaatctgtagttggaaagcctattaaatttgtaggaatgggagaaaaacttgatgat
ttagagttgttccatcccgaaagattagcttcaagaattcttggaatgggagatgtagtt
tctttagttgagaaggcgcaagaagcaattggtgaagaggatgctaaatctcttgaggag
aaaattagaactcaaaagtttgatttagatgatttcttaaagcaattacaaaatataaaa
aaattaggttctctaggaaacatattaaaaatgattcctggtatgggacaaattggggat
ttagcaccagctgaaaaagagatgaaaaaagttgaggctattattcaatcaatgactaga
gaggaaagaaaaaaacctgaaatattaaaagctagtcgtaagctaagaattgcaaaaggt
agtggaacagaagttgctgacataaataagctactgaaacaatttgaacagatgagagaa
atgatgaaaatgttctcaactggaaagttcccacaacttcctggaatgggtggaagaaaa
ggtggaatgaagtttccattttaa
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