Cetobacterium somerae: MKD34_07075
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Entry
MKD34_07075 CDS
T08261
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csom
Cetobacterium somerae
Pathway
csom03420
Nucleotide excision repair
csom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MKD34_07075
03430 Mismatch repair
MKD34_07075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_07075
Enzymes [BR:
csom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKD34_07075
DNA repair and recombination proteins [BR:
csom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKD34_07075
MMR (mismatch excision repair)
Other MMR factors
MKD34_07075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
PhoH
DEAD
ResIII
REP_ORF2-G2P
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UPO96908
LinkDB
All DBs
Position
1538224..1539693
Genome browser
AA seq
489 aa
AA seq
DB search
MKENYLKNISLKNLDLSDNFKNFLINNLNFDQLIAVINFNGHFLVIAGAGSGKTRTIIYR
ALLLIELKIPSKNILILTFTRKAINEIKIRISSFLPNSNIYIETFHSLAYKYLKKYSQNK
CFKILTTDDALVLAKKTLLYDNILKIFSKDILIKIISLTSSSILKEYYFKKLDEKSKTLI
INFLNNFELLKKTENFYSFNDLLIQFYKLLSLNLITTDFQYIMVDEYQDTDNLQVHILKL
LAKNSNLMVVGDDYQSIYGFKGTSMENILNFSNEFPNVKTIILKENYRSTNPILHLSNEF
SKKLKYCFRKSLITKDSSLKKPNLNIFKNHFNEISFIFDKIKYILELNPTATIGILFRNF
IYMEEFIKFFESSNIKFNIASNPFLENIFKHKFHNTNITLSFLTIHSSKGLEWDYVFIPL
LLEGIIPSSIGDALNLEEEKRLFYVALTRAKKELFLSYPLSFYSDFGLFKTPSQFIENID
SSFFNIKRG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaactatttaaaaaatatatctttaaaaaatttagatttatctgataatttc
aaaaattttttaatcaataatttaaattttgatcaattaatagccgtaataaattttaat
ggccattttttagttatagcaggagcaggttctggaaagacaagaaccattatatataga
gctcttcttttaattgaacttaaaataccttctaaaaacattttaattctaacttttact
agaaaagctattaatgaaataaaaataagaatcagttcttttttacctaattcaaatatt
tatattgaaacttttcattctttagcatataaatatttaaaaaaatatagtcaaaataaa
tgttttaaaattcttactacagatgatgctttagttttagctaaaaaaactcttctttat
gacaatattttaaaaattttttctaaagatattttaataaaaattatctctttaacctct
tcctctattttaaaagaatattattttaaaaaactagatgaaaaatctaaaactttaatt
ataaattttttaaataattttgaattattaaaaaaaacagaaaatttctattcttttaat
gatctacttattcaattttataaactattaagcctaaatttaattactaccgattttcaa
tatattatggttgacgaatatcaagatactgataatttacaagttcatattttaaaatta
ctagctaaaaattctaatctcatggttgttggggatgactatcaaagtatttatggtttt
aaaggaacttccatggaaaatattctaaatttttctaatgaatttcccaatgttaaaact
attattttaaaagaaaactatcgaagtaccaatcctattttacatttatctaatgaattt
tctaaaaaattaaaatattgttttagaaaatcacttataactaaagatagctctttaaaa
aaacctaatctaaatatttttaaaaatcattttaatgaaatttcatttatttttgataaa
atcaaatatatcttagagttgaatccaactgctacgattggaattctttttagaaacttt
atttacatggaagagtttatcaaattctttgaatcttctaatattaaatttaatattgct
tctaatccgtttttagaaaatatttttaaacataaatttcataatacaaatataactctc
tcatttttaaccatacatagctctaaaggattagaatgggattatgtatttattcctctt
cttttagaaggtatcattccaagctcaataggtgatgctcttaatctagaggaagaaaaa
agacttttttatgtagctttaactcgagctaaaaaagaactctttttgtcttatccttta
tctttttatagtgactttggattatttaaaactccatctcaatttatagaaaatattgat
tctagcttttttaatataaaaagaggatag
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