Cetobacterium somerae: MKD34_07210
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Entry
MKD34_07210 CDS
T08261
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csom
Cetobacterium somerae
Pathway
csom03030
DNA replication
csom03430
Mismatch repair
csom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKD34_07210
03430 Mismatch repair
MKD34_07210
03440 Homologous recombination
MKD34_07210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csom03032
]
MKD34_07210
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_07210
Enzymes [BR:
csom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKD34_07210
DNA replication proteins [BR:
csom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKD34_07210
DNA repair and recombination proteins [BR:
csom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKD34_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPO96934
LinkDB
All DBs
Position
complement(1567085..1570501)
Genome browser
AA seq
1138 aa
AA seq
DB search
MNKNFVHLHLHTEYSLLDGVGKIEEYLDRAKSLNMKAMAITDHGNMYGAIEFYKCAIKKG
IKPIIGIEAYISEFEMEKKDGRNFHLILLAKNLTGYKNLLKISSIGFLKGFYYRPRVDKE
FLKKHSEGIIALSACMQGEVSRAILENEKEEVIDKKIENYIEIFGKENFYLEVQGNGVDG
QKELNKELQKYSKKHKISCVATNDTHYVYEGDHVLQDLVICIQTGAKVSDTNRMKIETKE
LFLKSRMEVINSLGDDFIEAIDMTEKIADRCNLNLEFGELKFPKYEIPNCVKSSGEFLRK
IVYKGLAQRYPSGLNEELLKRIEYELDVILKMGYEEYFIVVWDFIAYAKGKNIPIGPGRG
SAAGSLVAYALKITDLDPLKYNLIFERFLNPERISMPDIDIDICQERREEVIEYVTKKYG
EDKVAQIITFGRMKARAALRDVGRVLDVNLVKVDKIAKLIPAFSTLEEALKENSELRELY
TEDNEIRNLVNLSQRLENKVRHASIHAAGVVITKDPLMEVVPLYSDNKDHKISTQYQMKE
LEELGLLKMDFLGLRNLTNIQRTIEYIKESKGKNIKLEEISLNETSVYEMLSSGDSLGVF
QLESIGIRKILVQLKPNRFEDIIALLALYRPGPLGSGMVESFINCKNGLEEIKYPHPSLE
KVLKETYGVILYQEQVMKIANIMASYSLGEADLLRRAMGKKQASIMDENREKFVKRSVDN
GYSKEKAEEIFDLIDKFAGYGFNKSHSAAYALIAYWTAYFKYFYPEEYYASIMTSEKSNV
ENVAFYIEDAKAHKLELKLSDVNNPVSKFTVENGGIRFSLAAIKNVGESLAQKIKIEFEK
NGNYLRYEDFIYRLRGQGLNKKNIEALVYSGALDSLPGNRKQKIESIEKVIDYANKKIKE
DDIQQMNLFGGAKSEMVSFVLPDVTDFTPDEKLEKEKEFLGFYYSAHPLDKYNWLVKTYK
MNKISEIKLENPLHIIKTYGILRDVKKILTKKTKEPMCTFILEDYYDQISGIIFPREYKD
YLNIELEGKAVVIDGSIQIDYFNGNENKKLVVKSMKSLNSIEFNKKNRIYILINEKSKDK
YNRLKEILLESKGEVPLSFAIDINGNKEIKNSKLTIEITPKLIKKIEELLGEKSVVIR
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaattttgttcatttacatttacatacagagtacagtctcctagatggggtt
ggtaaaatagaggagtatttagatagagctaagagtttaaatatgaaagctatggctatt
acagatcatggaaatatgtatggagctatagagttttataaatgtgctattaaaaaaggg
attaaaccaattattggtattgaggcatatatatcagaatttgaaatggaaaaaaaagat
ggaagaaattttcatctaatacttttagctaagaacttaacagggtataaaaacctttta
aaaatatcttcaataggatttttaaaagggttttattatagacctcgtgttgataaagag
tttttaaagaagcatagtgagggtattatagctttatcagcatgcatgcagggagaagtt
tcaagagcaattcttgagaatgaaaaagaagaagtcattgataagaaaatagaaaattat
atagaaatttttggcaaagaaaatttttatttggaagttcaaggaaacggagtagatggc
caaaaagaattaaataaagaattacaaaaatattctaagaaacataaaataagttgtgta
gcaacaaatgatacgcattatgtatatgaaggtgatcatgtattacaagacttggtaatt
tgtatccaaactggagctaaagtttcagatacaaataggatgaaaatagagactaaagaa
ctattcttgaaaagtagaatggaagttataaattctttaggagatgactttattgaagct
attgatatgacagaaaagatagctgatagatgcaatttaaatttagaatttggtgagtta
aagtttccaaaatatgaaattccaaattgtgtaaaaagttcaggagaatttttaagaaaa
atagtatataaaggattagctcaaagatacccaagtggattgaatgaagagcttttaaaa
agaatagaatatgaattagatgttattttaaaaatgggatatgaggaatattttatagtt
gtatgggattttattgcatatgcaaaaggaaaaaatataccaattggcccaggaagagga
tcagctgctggaagtttagtggcttatgccttaaagataacagatttagaccctttaaaa
tataatctaatttttgaaagatttttaaatccagaaagaatttctatgccagatatagat
atagatatttgtcaagaaagaagagaagaagtaattgaatatgttactaaaaaatatgga
gaagataaagtagcacaaataattacatttggtagaatgaaagctagagctgctttaaga
gacgtaggaagagtattagatgttaatttagttaaagtagataaaatagcaaaattaata
cctgcattttcaacactagaagaagcattgaaagagaactcagaattaagagaattatat
acagaggataatgaaattagaaatctagtaaatctgtctcaaagattagaaaataaagtg
agacatgcatctattcatgctgctggagttgtgataactaaagatccattaatggaagta
gttcccttatatagtgacaataaggatcataaaatttcgacacagtatcaaatgaaagaa
ttagaggagctaggtctacttaaaatggattttctaggacttagaaatttaactaatatt
cagaggactattgagtatattaaggagagcaaaggaaaaaatataaagttagaagaaatt
tcattaaatgaaacttcagtatatgaaatgctttcatcaggagatagtttaggagtattt
caactagaatcaataggtataagaaaaatattggttcaattaaaacctaatagatttgag
gatataatagcattactagctctttatcgtccgggaccattaggatctggaatggttgaa
agttttataaattgtaaaaatggattagaggagataaaatatcctcatccaagtttagaa
aaggtattaaaagaaacatatggagttattttatatcaagaacaagtaatgaaaatagct
aatataatggctagttattctttgggagaagctgatcttttaagaagagcgatgggaaaa
aaacaagcttctataatggatgaaaatagggagaaatttgtaaaaagatctgtagataat
ggatattctaaagaaaaggcagaggagatatttgatttaatagataaatttgcaggatat
ggattcaataaatcccattcagcagcgtatgcattaatagcttattggactgcatacttt
aaatatttctatccagaagaatattatgcatctataatgacatctgaaaaaagcaatgtc
gaaaatgttgcattttatatagaggatgcaaaagcacataaattagagttgaaattatct
gatgttaataatccagtttcgaaatttactgtagagaatggtgggattagattttctcta
gcagctataaaaaatgtaggagaaagtttagctcaaaaaattaaaatagaatttgaaaaa
aatggtaattatttaagatatgaggattttatatatagattaagaggacaaggacttaat
aaaaaaaatatagaagcactggtttattctggagctttagattctcttcctggaaatcgt
aagcaaaaaatcgaatcgattgaaaaagttattgattatgcaaataagaaaataaaagaa
gatgatattcagcaaatgaatcttttcggaggagcaaaatcagaaatggtaagttttgtt
ttacctgatgtaacggactttactccagatgaaaaattagaaaaagagaaagaattttta
gggttctactacagcgcacatcctctagataagtataattggttagtaaaaacatataaa
atgaataaaatttcagaaataaaattagaaaatccactgcatataattaaaacttatggt
atactaagggatgtgaaaaaaatattaacaaaaaagacaaaggaacctatgtgtaccttt
attcttgaagattattatgatcaaatttctggaattatttttccaagagagtataaagat
tatttaaatatagaacttgaaggtaaggctgtagtaatagacggaagtattcaaattgat
tattttaatggaaacgaaaataaaaaattagttgtaaaaagtatgaagtctttaaattca
atagagtttaataaaaaaaatagaatatatatattaattaatgaaaaatctaaagataag
tataatcgactaaaggagattcttttagagagtaaaggagaagttccattaagttttgct
atagatattaatgggaataaagagataaaaaactcaaaactaacgattgaaataactcct
aaattgataaaaaaaatagaggaattattgggagaaaaaagtgtagttataagataa
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