Cetobacterium somerae: MKD34_07440
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Entry
MKD34_07440 CDS
T08261
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csom
Cetobacterium somerae
Pathway
csom03420
Nucleotide excision repair
csom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MKD34_07440
03430 Mismatch repair
MKD34_07440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_07440
Enzymes [BR:
csom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKD34_07440
DNA repair and recombination proteins [BR:
csom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKD34_07440
MMR (mismatch excision repair)
Other MMR factors
MKD34_07440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
Cas_Cas4
UvrD_C_2
AAA_11
AAA_30
DUF2800
Motif
Other DBs
NCBI-ProteinID:
UPO96979
LinkDB
All DBs
Position
complement(1614749..1617529)
Genome browser
AA seq
926 aa
AA seq
DB search
MNLNLSQKEAVENIDGPLLIIAGPGSGKTRTLVERMVYMIKERNIKPDEILVSTFTERAA
RELTTRIGNRLKNEKIYLEGLYIGTLHSICLKIIDENIEYSNLEKGYRVLDNVDQKFFIF
SKLKFFKDIKGFKEFFQNKSYLTNWKIGESLIKWFNRFSEEGLEVNDDSFLAKSYQIYKK
ILFEENVIDFSMIQCEAYRILNENSKILKNFQEKIKYIMIDEYQDTNTIQEKLIFLIGGE
NQNICVVGDDDQGIYRFRGATIRNILQFEGRVGKVCKIVKLEVNYRSEKDIVNFCKEWID
SLYWDEFRHSKELIVPKDKNIDRTRVVKLSVENSENKWQERIANFLIFMKNSKKITDYNQ
VAFLFRSVRNKRIISLAHYLEYKGIGVYSPRSNLFFNREEIILIIGIFLYILLRADSKIY
NNEYKLEILDYYKKCLNSIEKKIKIDNELKKDLDILKNEYENINKNKGNLLSLYYEIIAL
NCFKNIFENEENSVLQNRALYNLGIFSKIIEKADKISKIQNLTSENILKIGDYLFTMHLK
FLKQNGVDEYEDIKEYAPKGAVSFLTIHQSKGLEFPVVIVGSLESIPEVDRDDEGELEKK
YIPYNNFEPEYRIKDFDFWRLYYTAFSRAKNLLILSCVESNKGKRQVPSLPFKRVYESIP
DILSGDLKFSELDIENTSTIDIKDSYSYTGDLLKYKECPYRYKLNKIYDFQRKKTIENFY
GNLIHESLEYINKTIINNKYLNIEEIENRYYSSYEMMKKKENLYLDNDVLKKGLNQILNY
YNNDLIKMKIVDVEKNLFVFRENYTIEGKLDLIIQDGENLKIIDFKTGSDNLDNESLENY
IAQIKLYCYLLSMNSEKKVLGGYIYFVKNQNKIEIPYTLGDEEEILKDFDSITEQISNGM
FSEKRLSEEKCLKCEFKKHCFGINMI
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaatttaagtcaaaaagaagcagtagaaaatattgatggaccattactaata
atagctggtccaggttctgggaaaacaagaactttagtagagagaatggtttatatgata
aaagaaagaaacataaaaccagatgaaatattagtttctacatttacagaaagggctgca
agagagttaacaacaagaataggaaatagattaaaaaatgaaaaaatatatttagaagga
ttgtatataggaaccctccattccatttgcttaaaaataatagatgaaaatatagaatac
tcaaatttagaaaaaggatatagagttttagataatgtagatcaaaaattttttattttt
tctaagttaaaattttttaaagatattaaaggctttaaagaattctttcaaaataaaagt
tatctaacaaactggaaaattggagaaagtttaataaaatggtttaatagatttagtgaa
gagggattagaagtaaatgatgatagttttttagcaaaaagttatcaaatatataaaaaa
attctttttgaagaaaatgttatagatttttcaatgattcaatgtgaagcttatagaatt
ttaaatgaaaactctaaaattttaaaaaattttcaagaaaaaataaaatatattatgatt
gatgaatatcaggatactaatacaatacaagaaaaattaatttttttaataggtggagaa
aatcaaaatatttgtgtagtgggggatgatgatcaaggaatctatagatttagaggagct
acaattagaaatattcttcagtttgaaggaagagtaggaaaggtttgtaaaattgttaaa
ttggaagtgaactatagatctgaaaaagatattgttaatttctgtaaagaatggatagat
agtctatattgggatgaatttagacattcaaaagaattgattgtgcctaaagataaaaat
attgacagaacaagagttgtaaaattatcagtagaaaattctgaaaataagtggcaggaa
aggattgctaattttttaatttttatgaaaaactcaaagaagataactgattataatcaa
gtagcttttttattcagatcagtaaggaacaaaagaataatttccttagcccactattta
gaatataaaggaattggtgtctattcacctagatcaaatttattttttaatagagaagaa
attatattgattataggtatttttctatatattttattgagagcagatagcaagatttat
aataatgaatataaattagaaattttggattattataaaaaatgtttaaattctatagaa
aaaaagataaaaatagataatgagttaaaaaaagatttagatattcttaaaaatgaatat
gaaaatataaataaaaacaaaggaaatttattgagtttatattatgaaataatagcgtta
aattgtttcaaaaatatatttgaaaatgaagagaatagtgttttacaaaatagagcatta
tataatttaggaatattttctaaaattattgaaaaagcagataaaatttcgaaaattcaa
aatttaactagtgaaaatatattaaaaattggggactatctgtttacaatgcatttaaaa
tttttaaagcaaaatggtgtagatgaatatgaggatataaaagaatatgctcctaaaggt
gctgtatcatttttaacaattcatcaatcaaaaggattagagtttcctgttgttatagta
ggttctttagaaagcattcctgaagttgatagagatgatgaaggagaacttgaaaaaaag
tatataccatataataattttgaaccagaatatagaataaaagattttgatttttggcga
ttatattatactgctttttcaagagctaaaaacttattaatactaagttgtgttgaaagt
aataaaggaaaaaggcaagtcccttcactgccatttaaaagagtttacgaaagtattcca
gatattttatcaggagatttaaaattttcagaattagatattgaaaatacaagtactata
gatataaaagatagttactcctatactggagatttactaaaatacaaagaatgtccttat
agatataaattgaataaaatttatgattttcaaagaaagaaaacaattgaaaatttttat
ggaaacttaattcatgaaagtttagagtatataaataaaactataattaataataaatat
ttaaatattgaagaaatagagaatagatattactctagttatgaaatgatgaaaaagaaa
gaaaatttatatttagataatgatgttttaaaaaaaggactaaatcaaatattgaattat
tataataatgatttgataaaaatgaaaatagtagatgttgaaaaaaatttatttgtattt
agagaaaattacacaatagaaggaaaattagatttgattatacaagatggagaaaattta
aaaataattgattttaaaacagggtcagataatttagataatgaaagtctagaaaattat
atagctcaaataaagctatactgttatttattatcaatgaatagtgagaaaaaggttttg
ggtggctatatatattttgtaaaaaatcagaataaaattgaaataccatatactttaggt
gatgaagaagaaattttaaaagattttgattcaataacagagcagatatctaacggtatg
ttttcagaaaaaagattatctgaagaaaaatgtttaaaatgtgaatttaaaaagcactgt
tttggtataaatatgatataa
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