Cetobacterium somerae: MKD34_07815
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Entry
MKD34_07815 CDS
T08261
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
csom
Cetobacterium somerae
Pathway
csom00900
Terpenoid backbone biosynthesis
csom01100
Metabolic pathways
csom01110
Biosynthesis of secondary metabolites
csom03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MKD34_07815
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MKD34_07815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
csom03011
]
MKD34_07815
Enzymes [BR:
csom01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
MKD34_07815
Ribosome [BR:
csom03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
MKD34_07815
Bacteria
MKD34_07815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
CSD
COG4_N
DDR_swiveling
MBT
Motif
Other DBs
NCBI-ProteinID:
UPO97039
LinkDB
All DBs
Position
complement(1680200..1681822)
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AA seq
540 aa
AA seq
DB search
MSNFDYYEDFEALLNEYMPVKEDEEIKTKVTGTIVNMDRNFTYLEVPGEPKAVRVRTEEL
TGYAVGDEVEVLIVSQAEEEDSLVLIGSKKRIDMEIGAEKLEKALQNHEIITGKILKRVK
GGYIVEVYHQQGFLPNSLSEIPADQGDSFIGKELPLAVKEVKEDKKGKKILLSRKEIVVA
KELEAIDKLTLGEVVKATVLEVLDFGLTVKLDEARGFIHISEVDWKKTSDLHKLYKAGDV
IEAKIIEIERDKRNVKLSIKSLTKNPWDIVAENNSIGQEVTGKVTRIVNYGAFVELLPGV
EGLIHSSDFSWTSKKVNVNNFVKVGDEVKVVITDLSPKERKLKLGIKQLSSNPWEDAENK
FAVGTILTGTVVEVKPFGIFVQVEEGVDGFIHNSDFTWSGNKRYSKGDKIEFKVVELNLE
DQKIKGSIKELTKSPWETALENYKVGDRVEKEIKNIQDFGMFVKLEEGVDGFIPTQLASR
DFIKNLRDTFKLGEVVLAEIVEIDSEKKRIKLSIKKVQLEKEKNENKELIEKYGVSSSEE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactttgattactacgaagattttgaagcattattaaacgagtacatgccagta
aaagaggatgaagaaataaaaactaaagtgactggaacaattgtaaatatggatagaaac
tttacatatttagaagtacctggagagccaaaggctgtaagagtaagaacagaagagtta
acaggatatgctgtaggagacgaagttgaagttctaatagtgtctcaagctgaagaagag
gattctttagttttaattggttctaaaaaaagaattgatatggaaattggagctgaaaaa
ttagaaaaagcacttcaaaatcatgagattataactggaaaaattttaaaaagagtaaaa
ggtggatatattgttgaagtatatcatcaacaagggttcttacctaactcgttatcagaa
attcctgcagatcaaggagattcatttattggaaaagaattaccacttgctgtaaaagag
gtaaaagaagataaaaaaggaaagaaaattcttttatcaagaaaagaaattgttgttgcg
aaagaattagaagcaattgataagttaactttaggagaagtagtaaaagctactgtttta
gaagtgttagactttggattgacagtaaaattagatgaagctagaggatttattcatatt
tcagaagtagattggaaaaaaacttcagatttacacaaattgtataaagcaggagatgta
attgaagcgaaaattatagaaattgaaagagataaaagaaatgtaaagttatctataaaa
tctttaacaaaaaatccttgggatatagttgctgaaaacaatagtataggtcaagaggta
actggtaaagtgacaagaatagtaaattatggagcttttgtagagttattaccgggtgtt
gaaggattaattcatagttcagatttttcttggacaagtaaaaaagtaaatgttaataac
tttgttaaagtaggagatgaagttaaagttgttattacagacttatcacctaaagaaaga
aagttaaagttaggaataaagcaattaagttctaatccatgggaagatgctgaaaataaa
tttgcagtgggaacaattttaactggtacagttgtagaggttaaaccatttggaatattt
gtgcaagttgaagagggagtagatggatttattcataattcagactttacatggtcagga
aataaaagatattctaagggagataagatagagtttaaagtagttgagttaaacttagag
gatcaaaagataaaaggtagtattaaggagctaacaaagagcccttgggaaacagcttta
gagaattataaagttggagacagagtggaaaaagagataaaaaatattcaagatttcgga
atgtttgtaaaattagaagagggagtagatggatttattccgactcaattagcttctaga
gattttataaagaatttaagagatacatttaagcttggagaagttgttttagctgagatt
gttgaaattgattctgaaaagaaaagaataaaactttctataaaaaaagttcaattagaa
aaagaaaaaaatgaaaacaaagagttaattgaaaagtatggagtttcttcaagcgaagag
taa
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