Cetobacterium somerae: MKD34_09025
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Entry
MKD34_09025 CDS
T08261
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
csom
Cetobacterium somerae
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csom03016
]
MKD34_09025 (mnmE)
Transfer RNA biogenesis [BR:
csom03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
MKD34_09025 (mnmE)
Prokaryotic type
Methyltransferases
MKD34_09025 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
MMR_HSR1_Xtn
ABC_tran
RsgA_GTPase
Roc
ATP-synt_ab
ABC_ATPase
GnsAB_toxin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UPO97245
LinkDB
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Position
complement(1900151..1901518)
Genome browser
AA seq
455 aa
AA seq
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MFDTIAAISTPRGEGGIGIVRMSGSDSLCILTKIFKPISKKEVSELKNFSINYGHLYDGD
QIIDEVLVSIMKGPNTYTKEDIVEINCHGGFLITEKVLELVLKSGARIAEIGEFTRRAFM
NGRLDLTQAEAVIDLIHGKTDKSISLSLNQLRGDLREQIDILKKQLLDVSAHVNVVLDYP
EEGIDDPLPHDLVENLHNVVNTTDALIKSYNKGKMIKEGVKTAIVGKPNVGKSSLLNSIL
REERAIVTHIAGTTRDVIEEVVNLNGIPLVLVDTAGIRKTDDLVENIGVEKSKELIEKAD
LVLFVVDNSRELDEEDLKIHERIHADKVIGLINKTDVESKLDITPLTKIKKWIKISALEK
IGIDSMEKEIYNYVISGQVEDSSQKLVITNVRHKSALEKTKQAVENIFETIDMGLPMDLI
AVDLKEALDSLSEVTGEISNEDLLDHIFSNFCVGK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatactattgctgccatttcaactccaagaggagaaggtggaataggaattgtt
agaatgtcaggaagtgattctttatgtatactgacaaaaatatttaaacctatatcaaaa
aaagaagttagcgaacttaaaaattttagtattaattatggacatctttatgatggagat
caaataatagatgaagttttagtttctataatgaaaggacctaatacttatactaaagaa
gatattgtagaaataaattgccatggtggatttttaattacagaaaaggttttagagtta
gttttaaaaagtggagctagaatagctgaaataggtgaatttactagaagagcttttatg
aatggtagattagatttaactcaagctgaagctgtaatagacttaatacatggaaaaacg
gataaaagtatatcattatcattaaatcaacttagaggagatttaagagagcaaatcgat
atattaaaaaagcaacttttagatgtttctgcacatgttaatgtagttttagattatcct
gaagaagggatagatgatccattaccacatgatttagtagaaaatttacataatgttgta
aatacaacagatgctttaattaaatcttataataagggaaaaatgattaaagaaggtgta
aaaacagctatagtaggtaagcctaatgttggaaaatcaagtttattaaactctatttta
agagaagagagagcgattgtaactcatatagctggaactactagagatgttattgaagaa
gttgttaatttgaatggaattcctttagtcttagtagatactgcaggaataagaaaaaca
gatgatttagtagaaaatataggtgtagaaaaatcaaaagagttaattgaaaaagcagat
ttagttttatttgttgttgataactctagagaattagatgaagaagatttaaaaatacat
gaaagaattcatgctgataaagttataggtcttataaataaaacagatgttgaatctaaa
ttagatataacaccattaacaaaaataaaaaaatggataaaaatttctgcattagaaaaa
ataggaatagattcaatggagaaagagatatacaattatgttatttctggtcaagttgaa
gatagttcacaaaaattagttattactaatgttagacataagtcagcactagaaaaaact
aagcaagcagtggaaaatatatttgaaacaatagatatgggattaccaatggatttaata
gctgtagacttaaaagaagctttagattcattgtcagaggtaacaggagagattagtaat
gaagatcttttagatcatatctttagtaatttctgtgtaggaaaataa
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