Cetobacterium somerae: MKD34_12080
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Entry
MKD34_12080 CDS
T08261
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
csom
Cetobacterium somerae
Pathway
csom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MKD34_12080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csom03400
]
MKD34_12080
Enzymes [BR:
csom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MKD34_12080
DNA repair and recombination proteins [BR:
csom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MKD34_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UPO98368
LinkDB
All DBs
Position
unnamed1:complement(648518..649282)
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AA seq
254 aa
AA seq
DB search
MKKLISWNVNGLRAVLQKNFLEYFNSVDADIFCLQEIKLQEGQVDFNPEGYNCYWNYAEK
KGYSGTAIFTKENPISVSYDIGIDHHDKEGRVITLEFKDYYLVNVYTPNSQTELARLDYR
MTWEDDFRSYLLDLDSKKPVILCGDLNVAHTEIDLKNPKSNKTNAGFTIEERNKFSELLE
SGFVDSFRYLHPDAIEKYSWWSYRFSARKNNAGWRIDYFVVSNKIKDKIVEANIHNEIMG
SDHCPVELIIKELS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgatttcttggaatgttaatggtcttagagctgttcttcaaaagaatttt
ttagaatactttaattcagttgatgctgatattttttgtttacaggagataaagcttcag
gagggacaagttgattttaatccagaaggatataactgttactggaactacgctgaaaaa
aaaggatattctggaactgctatatttactaaagaaaatccaatctctgtatcatatgat
attggaatagatcatcacgataaagagggaagagttattactttagaatttaaagactac
tatttagtaaatgtttatactcctaactcacaaactgaattagctagactagattataga
atgacttgggaagatgattttagaagctatcttttagatttagattctaaaaaacctgtt
attctttgtggagatctaaacgttgctcatacagagattgacttaaaaaatccaaaatct
aataaaacaaatgctggattcactattgaggaaagaaataaatttagcgaactgcttgaa
agtggatttgtagatagttttagatatttacacccagatgctattgaaaaatactcttgg
tggtcatatagatttagtgctagaaaaaataatgcaggttggagaattgattattttgta
gtttctaataaaataaaagataaaattgtagaagctaacattcataatgagattatgggg
tctgatcactgtcctgtagaacttataataaaagaactctcttaa
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