Corynebacterium simulans: WM42_0166
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Entry
WM42_0166 CDS
T04316
Name
(GenBank) putative dNA replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
csp
Corynebacterium simulans
Pathway
csp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WM42_0166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csp03400
]
WM42_0166
Enzymes [BR:
csp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WM42_0166
DNA repair and recombination proteins [BR:
csp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WM42_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
RHH_1
Motif
Other DBs
NCBI-ProteinID:
AMO87923
LinkDB
All DBs
Position
complement(165770..167764)
Genome browser
AA seq
664 aa
AA seq
DB search
MLPLLGVAHLDRGFDYRVDESQSAAAKPGVRVRIRFNGRLTDAIVLERRNDSEFDGQLRY
LDRVISPYAVYSAELAELIESLAARYGAVRSDIIRSAIPPRHAKAEESDLATPWEEMGEA
QEPVLSGWSAYQHGESFVDSVLAGGLARAAWQIAPGDDWASAVATLAAKVALDGGGVLLV
VPDQRGVDKLEKALRKVVAAKQITVLGNATGPQARYRRYLSALVGQARIVLGTRSAAFAP
VQNLRLAFIFDDGNDNLVDNLKPYVHTREVLTTRSAKEGCSLILAGHARSAETQLLVESG
WAHDLLASESTLETRRPAMTAVGAFGLQVARDLQGGTTSVTGPAFQAAKRALDRAQPVLV
QVPRKGYAPILACGNCRAPARCRHCNGPLGLAADRRGGDTHHASLPTCRWCGRIESKFRC
VECGSPRLRAIVLGSERTAEELGRAFPSTRIVVSGGNKVVDEVADEAALVIATPGAEPAV
AHGGHYGAALLLDAGTLLNRQDLRATEEALSKWASAATLVCSHNKGGEVVIAADGELPVI
QSLLNWDMVGAARRELAGRREVRFPPAVHMAAVDGADASLDHFMSIAELPENVEVLGPVP
LPPGLSLPGEYDEQRFGPPQRVLIRTPLGPRAQLGNALRKANAARSARKDELPLRIQVDP
IHIG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcctttattgggcgtcgcccacctagaccgcggcttcgattatcgcgtcgacgaa
tcgcagtcggctgctgctaagcccggcgtgcgcgtgcgcatccgcttcaatgggcggctg
acagacgccatcgttttggagcgccgcaatgacagcgagttcgacggccagctgcgctat
ctggaccgcgtgatttcgccttatgcggtctactcagctgagcttgccgaactcatcgag
tcgctcgcggcccgctatggggcggtgcgctcagacattattcgctccgcgattccgccg
cggcatgccaaggcagaagaatccgatctcgccaccccgtgggaggagatgggcgaggca
caagaaccagttctttcggggtggtcggcatatcagcatggtgagtcctttgtggactcg
gtattggccggtgggctggcccgcgccgcatggcagattgcgccgggcgatgactgggcg
agtgccgtcgcgacattggccgcaaaagtggcactcgacggcggcggagtcttgctcgtg
gtgccggaccaacgcggcgtcgacaagctggaaaaggctttgcgaaaagtggtcgcagcc
aagcagatcaccgtcttgggcaatgccacgggtccgcaggcacgctaccgccgatatctt
tccgctttggtggggcaggcgcgcattgtgttgggtacccgctcggcggcctttgcgccg
gtacagaacctacgcctggcgttcatttttgatgatggcaacgacaacctcgtagataac
ctaaaaccctatgtccacacccgcgaggtgctgaccacgcgctcagctaaggaaggctgc
agtctgattctggcggggcatgcccgcagcgcagagacacagctgctggtcgaatctggg
tgggcgcatgacctgctcgctagtgaatccacgttggaaacacggcgtcctgcaatgact
gcggtaggggcgtttggcctgcaggttgcgcgcgatctgcagggcggaaccacctcggtt
acagggcctgccttccaagctgcgaagcgtgcgctggaccgtgcgcagccggtgctcgtg
caggtcccgcggaagggctacgcaccaattctggcttgcggcaattgccgagcccccgcg
cgctgccgccactgtaacggccccttgggccttgccgccgatagacgcgggggagatacg
caccatgcctccttgcccacgtgtcggtggtgtggccgcatcgagtcgaaattccgctgt
gtcgaatgcggctcgccgcggctgcgggctatcgtactgggctctgagcgcacggcggaa
gagttgggacgggcgtttccgagtacccgcatcgttgtctcgggcggcaacaaggtcgta
gacgaggtcgcagatgaggcggcactggtcatcgcaacgccgggcgcagaaccggccgtc
gcccacggcgggcactacggcgcagctttgctgttggatgcaggcacgctgctcaaccgc
caggatctgcgcgccacggaggaagctctctctaagtgggcgtctgcagctaccttggtc
tgttcgcacaacaagggcggtgaagtggtcatcgccgctgacggtgaactgccggtcatt
cagtccttgctgaattgggacatggttggtgccgcacgccgtgagctggcggggcgtcgg
gaagtgcgtttcccgccagcagtgcacatggctgcggtcgatggtgccgatgccagcctg
gatcacttcatgtctattgcggagctaccggaaaacgtggaggttttgggacccgtaccg
ttgccaccggggctgagcctgcccggcgaatatgacgagcagcgatttgggccgccgcaa
cgcgtactgattaggaccccgttgggcccgcgtgcccaattgggcaacgccttgcgtaag
gccaatgccgcccgcagcgcgcgcaaggacgagcttcctttgcgcatccaagtcgatccc
atccacatcggctag
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