Corynebacterium simulans: WM42_0564
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Entry
WM42_0564 CDS
T04316
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csp
Corynebacterium simulans
Pathway
csp03420
Nucleotide excision repair
csp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WM42_0564 (pcrA)
03430 Mismatch repair
WM42_0564 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csp03400
]
WM42_0564 (pcrA)
Enzymes [BR:
csp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WM42_0564 (pcrA)
DNA repair and recombination proteins [BR:
csp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WM42_0564 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
WM42_0564 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
DUF2067
TSP1_CFP_C
Motif
Other DBs
NCBI-ProteinID:
AMO88314
LinkDB
All DBs
Position
complement(576255..578660)
Genome browser
AA seq
801 aa
AA seq
DB search
MDPDPLTEGLNPQQLEAVTHAGSPLLIVAGAGSGKTAVLTRRIAYLMRNRGVAPWEILAI
TFTNKAATEMKERVGQLVGPVAERMWVSTFHSICVRILRQNAQLVQGLNTNFTIYDGDDA
RRLLTMIAKDMQLDLKKYTARVLANQISNHKNELVSPADALAEAEKTKNPFEITVARVFD
EYQRRLRAANSVDFDDLIGEVVRIFHQHPQVVDFYRRRFKHVLIDEYQDTNHAQYALVSA
LVGRGELGPDAPELCVVGDSDQSIYAFRGATIRNIQEFERDYPQAHTILLEQNYRSTQTI
LNAANALIAKNEGRREKNLWTAHGEGAKIVGYVADNEHDEARFIASEIDSLADKGRAYSD
MAIMYRTNNASRALEDIFVRSGIPYKVVGGTRFYERREIRDMVAYLRIIDNPDDTVSLRR
IINVPKRAIGDKAQSQIALHAENLGVSFGKALYDAAAGNIAGMGTRAVNAVSKFNEMMEG
IRAQIPSMINEVTHQPDLGDLLSAVLDATGYRAELENSNDPQDGARLDNLNELVSVAREF
SSEAANQMAFTGADAVEDLSPELAEGEALPGSLQAFLEKVSLVADADQIPDNETGVVTLM
TLHTAKGLEFPVVFLTGWEDGQFPHMRSLGDPKELSEERRLAYVGITRAREQLYLTRAIL
RSSWGNPMTNPASRFLAEVPEDLIDWRREEPDSSLSSAWGGDDSYQYGRSYGSDWSGWGR
TSPRATSSPSQRTRKPAPTSSMPKNNQLNLVVGDRVNHAKYGLGTVIDASGSGPRATVTV
DFGSAGKVRLMLIGGVPMEKL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
gtggaccccgatccgcttactgagggccttaacccgcagcagcttgaggcggttacgcac
gctggttcgccgctgctgattgtggcgggtgcgggctctggtaagactgctgtgcttacc
cgccgcattgcttatcttatgcgcaatcgtggggtggctccgtgggagattttggctatt
acctttaccaacaaggccgccacggagatgaaagagcgcgtgggccagctggtggggcca
gtggccgagcggatgtgggtttctaccttccactccatctgcgtgcggatcttgcgtcaa
aatgcgcagctggtgcagggactgaacaccaacttcactatttatgacggtgacgatgca
cgccgccttttgaccatgatcgccaaagacatgcagttggatctaaagaagtacaccgcc
cgtgtgctggccaatcagatttcgaatcacaaaaatgagctggtctcgccggctgacgct
ttggcagaagcagaaaagaccaagaatcctttcgagattacggttgcacgcgtcttcgat
gaatatcagcgccgcttacgtgcagccaattccgtggacttcgatgacctcatcggtgag
gtagtgcgtatcttccatcagcacccacaggtggtggatttctatcgtcgccgcttcaag
cacgttcttatcgatgagtatcaagacaccaaccatgcgcagtatgcgctggtttctgca
ttggtgggtaggggagagctaggccccgatgcaccagaattgtgcgtggtgggtgactca
gatcagtccatttatgccttccgtggcgctacgatccgcaacattcaggaattcgagcgt
gactatccgcaggcgcacaccattttgttggagcagaactatcgctccactcagaccatt
ctgaacgcggcgaacgctctcatcgcgaagaacgagggccgccgtgagaagaacctgtgg
actgcgcacggcgaaggcgcgaagatcgtcggctatgtcgccgataacgagcatgatgag
gcccgttttattgcttctgagatcgactctctggcagataagggccgcgcctattccgat
atggcgatcatgtaccgcacgaacaatgcctcgcgtgcgttggaagatatctttgttcgc
tccggaatcccgtacaaggttgtgggcggcactcgcttctatgaacgccgcgaaatccgt
gacatggtggcttatctgcgcatcattgataatccggatgacacagtgagcctgcgccgc
attatcaacgttcccaagcgcgccatcggtgataaggcgcaatcccagatcgcgctgcat
gcagagaacctgggagtgagctttggaaaggccctgtacgatgccgccgcgggcaacatt
gcgggcatgggcacacgagccgttaatgcagtgtcgaagttcaacgagatgatggaaggc
atccgcgctcagattccgagcatgattaacgaggttactcatcagccggatcttggtgat
ctgctcagtgccgtgctcgatgcaactggataccgtgcggagttggagaactcgaatgat
ccgcaggatggcgcgcggctggataacctcaacgagttggtttccgttgcccgagaattt
agctccgaggcggctaatcagatggcgtttaccggagccgacgctgtagaagatttaagc
ccagagctcgccgagggggaggccctacccggctcgctccaggctttcctagagaaggtg
tctttggtagctgacgcagaccaaatccctgacaacgaaactggcgtggtcacgctgatg
accttgcacactgccaagggcttggaattcccagtcgtcttcctcacaggctgggaagat
ggccaattcccgcacatgcgctctttaggggatccaaaagagctcagtgaggaacgccgc
ttggcttatgtgggcatcacacgcgctcgcgagcagctctatctcacccgcgcaatactt
cgctcgtcctggggtaacccgatgacgaatccggccagccgcttcctcgccgaggtcccc
gaagacctcatcgactggcgccgtgaagaaccagacagctcgctgtctagtgcatggggc
ggagatgattcctaccaatatggccgctcctatggctccgattggtccggctggggcaga
acctcaccgcgcgctacgtcttccccttcgcaacgcacgcgtaagcctgctcctaccagc
tcgatgcctaagaacaaccagctgaatttagttgtgggagaccgcgtcaaccacgccaag
tacggcctaggaacggtcatcgatgcctccggttccggtccacgcgccacggtgacggtg
gacttcggaagcgccggcaaagtgcgcttgatgctcatcggcggcgtgccgatggaaaag
ctttaa
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