KEGG   Corynebacterium simulans: WM42_0569
Entry
WM42_0569         CDS       T04316                                 
Name
(GenBank) helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
csp  Corynebacterium simulans
Brite
KEGG Orthology (KO) [BR:csp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csp03400]
    WM42_0569
Enzymes [BR:csp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WM42_0569
    5.6.2.6  RNA 3'-5' helicase
     WM42_0569
DNA repair and recombination proteins [BR:csp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    WM42_0569
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII AAA_25 DUF6406 PhoH
Other DBs
NCBI-ProteinID: AMO88319
UniProt: A0A127NRW7
LinkDB
Position
complement(583469..588361)
AA seq 1630 aa
MNKNVLTRFRPQVRQWFEDVFAAPTPVQREAWEQISSGNHALVVAPTGSGKTLAAFLWAL
NSLVEKEGQTALPVGQPVKGGTSGVKVLYISPLKALGVDVENNLRAPLNGIARAAERLGL
DAPDITVGVRSGDTPSAERSRQVRRPPDILITTPESAYLMLTSKAAGILSTVDTVIIDEI
HALAGTKRGVHLALTLERLAAVAGEFQRIGLSATVRPLSAVSNFLGGDRPVEIVAPPVEK
RWQLDVHVPVEDMSDLPTPEQGSTIGEMTVDDPLGITGPAAVADSALPTAKSIWPFIEED
LYGEIMEHRSTLVFVNSRRTAERLTSRLNELYAMEHDPESLSPATRRDPAQLMKQVDVAG
KAPAVIARAHHGSVSKDERTLTETMLKEGTLRAVVATSSLELGIDMGAVDLVVQVESPPS
VASGLQRVGRAGHSVGAVSQGSFYPKHRADLVQSTLTVARMREGLIEEMHSPQNPLDVLA
QQTVAAVAAAEVAPVTSPDNAGGLDVDAWYAMVRRAWPYRDLAREVFDSVIDLVSGVYPS
TDFAELKPRVVFDRITGRLSPRPGAQRVAVTNGGTIPDRGMFGVFLPAGAENAAPRRVGE
LDEEMVYESRVGDIFTLGATSWRIEEITRDQVIVTPAPGHTGRLPFWNGDQAGRPYELGK
ALGAYRRHVHLSPEIIQDADGHAVDNIVAYLQEQHEATGVIPDEKTLVLERFKDELGDWR
VVLHTPFGRGVNAAWALAVGQRVAELTGMDAQAVAGDDGIVLRLPEGEKEPDAALFLFDA
DEISDIVAEQVGGSALFASRFRECAARALLLPRRSPGKRAPLWQQRQRAEQLLDVARKYP
SFPIILETVREVLQDVYDLPALTETMRELALRCIRIAEVTTEQPSPFASTLLFNYTGAFI
YEGDSPLAEKRAAALALDPALLAKLLGTVELRELLDPEVIEQVHAQLQRTSAERRARTTE
EVADLLRVLGPIPVEEMAEHASVPLSAIDSLGARVMRVRIAGREHFAQPLDAPLLRDGLG
VPVPPGVAAQQSTITDALQQLVSRWARTRGPFVLGDLQAAFGLSASAAHTALASLDSVVE
GRYRQGIEETEYCAAEVLRTIRSRSLAAARAATEPVSAAAFGRFLPDWQQVAPVGQRPAL
RGADGVYSVIEQLAGVRLPASAWESLILPARVGDYSPTMLDELTSNGEVLIVGAGKAGTN
DPWIMLLPVDYAAQLAPQVDPDEQGLSMLQLAALEVLRGGGSYLFNDIAAQVPGTAEELR
EALWQLVEMGLVSPDSFAPIRTHIAAAGSRSGATAHRAKRRPTRSRLRMGRTSFAQTQGL
GGAATAPDVAGRWAASVSGQGVDATSRSVAHGEAWLDRYGVLTRGSVVAEDVLGGFALAY
KVLSGFEESGKAMRGYVIEGLGAAQFSTPAVIDRLRGMNDSPDVTGWPSGTASTAEINTY
VLAATDPANPYGAALAWPQRDGADGGHGPTRSAGALVVLMDGLCVAHLTRGGKTLTTFLD
ALPEGIDADEVLGKVLEGLTELIAAGRLSPLVIEKINGAPAFESAIATRLRGLGAGISPR
GVRISAKAAPPRTSRRIEDNRSDPWQKPMEPRRGRSVSEALAELPDLSFDDPPEPGRGAP
GGFRPRGSRR
NT seq 4893 nt   +upstreamnt  +downstreamnt
atgaacaaaaacgtcctaacccgcttccggccccaagtccggcaatggttcgaggacgtt
ttcgcagcgcccacgcccgtacagcgcgaggcatgggagcagatctcatccggcaaccat
gcgctcgtggtcgcccccaccggctccggtaaaaccctggcggcgtttttatgggcctta
aattccctcgtggaaaaggaaggccaaactgcactgcccgtgggacagccggtaaagggc
ggcacctcaggcgtcaaggttttgtatatctccccgctgaaggcgcttggcgtggacgtg
gaaaataacctgcgtgctccgctgaacggcatcgctcgtgcggcagaacgattaggactt
gatgcccccgacatcaccgtcggcgtacgctccggggatacaccttctgcagaacgctcc
cggcaggtacgccgcccgccggatatcctcatcaccactccggagtcggcttatttgatg
ctgacttcgaaggccgcgggcatcctatctaccgtcgataccgtcatcattgatgaaatc
cacgccctggctggcaccaagcgtggcgtacacctggcgctcacgctcgagcggctggcg
gccgtggcgggggagttccagcgcatcgggctatcggcaacggtgcgcccgctttctgca
gtgtcgaattttttgggcggcgacaggcccgtggaaatcgtggcaccgccggttgaaaaa
cgctggcagcttgatgtccacgtgcctgtggaagacatgtcggatctgcccaccccagag
caaggctccactatcggtgagatgacagtggatgatccactgggcattactggccccgcg
gcggtggctgattcggcattgcccaccgcgaaatccatttggccgtttattgaagaagac
ctctacggcgaaatcatggagcatcgctccacgctcgtgttcgtgaactcgcggcgtacc
gcggagcgcctgacctcccggctcaatgagctttatgccatggagcatgatccggaaagc
ttgtcgcctgctacgcgccgggacccagcgcagctgatgaagcaagtcgacgtcgccggc
aaggcacctgccgtcatcgctcgcgcacaccacggctcggtgtcgaaggatgagcgcaca
ttgactgaaacgatgctcaaggaaggaacactgcgagcagtggtggccaccagctcgcta
gagctgggcatcgacatgggcgcggtcgatctagtggtgcaggtggaatcaccgccttcg
gtagcctctggtctgcagcgtgtgggccgtgccgggcactccgtgggcgctgtatcgcag
ggttctttctatccgaagcaccgtgctgaccttgtgcaatccactcttaccgtggcgcgt
atgcgcgagggcctcatcgaggagatgcactccccgcagaacccattagacgtgttggca
cagcagaccgtggcagccgtcgccgccgccgaggttgctccggttacctccccagataac
gcgggtggcctagacgtggatgcctggtacgccatggtgcgccgcgcgtggccctatcgc
gatttggccagggaggtattcgattccgtcatcgacctggtctccggcgtctatccctcc
acggacttcgcggagctcaaaccccgcgtggtcttcgaccgcatcactggccggctgagc
ccgcgccccggtgcgcagcgcgtggctgttaccaacggcggcacgattccggaccgcgga
atgtttggcgtctttctgcctgcgggggcagaaaatgccgcgccccggcgcgtgggtgag
ctcgacgaggagatggtctatgaatcccgcgtgggcgatatctttaccttgggtgctact
agctggcgcattgaggaaatcacgcgcgatcaggtgattgtcacccctgcgccggggcac
actggccggttgcctttctggaatggtgaccaggcaggacgtccctatgagctaggcaag
gccttgggtgcttatcgccggcatgtgcacctttctccagagatcatccaggacgcagat
gggcatgcggtggataacatcgtggcctatctgcaggaacagcatgaggctacgggtgtt
attccggatgagaagaccttggttctcgagcgttttaaggacgaactcggggattggcgc
gtggtgttgcacacgccgttcggccgaggcgtgaatgctgcctgggcgcttgcggtgggg
cagcgggtggcggagctgaccggcatggacgcgcaggcagtggctggcgacgacggcatc
gtcctacgcttgcccgagggtgaaaaggagccggatgctgcgctttttcttttcgacgcc
gatgagatttcggacatcgtggccgagcaggtgggcggttccgcgctctttgcctcgcgt
tttcgtgagtgtgccgcgcgtgcgctgttgctgccgcgccgcagtcccggcaagcgcgcg
ccgctgtggcagcaacgtcagcgggcggaacagcttctcgacgtcgcgcggaagtaccct
tcctttcccatcatcctggagacggtccgcgaagtcctgcaggatgtctatgatctgccg
gcgttgacggaaaccatgcgcgagctggctttgcgttgcattcgcatcgcggaggtgacc
acagagcagccttcgccttttgcttcgacgctgctgtttaactacaccggcgctttcata
tacgagggcgattctccgctggcggaaaagcgggcggcggccctagcgcttgatccggcg
cttctggccaagcttttgggcacggtggagctgcgggagcttttagatccggaggtcatc
gagcaggtgcatgcccagctacagcgcacctccgcggagcgtcgggcgcgtacaacggag
gaagtcgcagacctgctgcgcgtgctggggccgattccggtggaagagatggcggagcat
gcctcggtgccgctgagcgcaattgattctctgggcgcccgcgtgatgcgggtgcgcatt
gccgggcgcgagcacttcgcacagccccttgacgccccgctgcttcgcgacggactcggc
gtgcccgtcccgcctggtgttgccgcgcagcagtccaccatcaccgatgccttgcaacag
ctggtctcgcgttgggcacgcacccgcgggcctttcgtgttgggggacttgcaggcggcc
tttggcctttcggcctcggcagcacacaccgcgctggcgagtctcgatagcgtggtggaa
ggccgctaccgccaaggaatcgaggagaccgagtactgcgctgcggaggtcttgcgcacc
attcgctcgcgctcgctggctgcggcacgcgctgcgacggagcctgttagcgctgccgct
ttcggacgcttcttgcccgattggcagcaggtagcgcccgtgggccagcggcctgcgcta
cgcggggcggatggcgtctacagcgtgattgaacagctcgccggagttaggctgccggct
tctgcgtgggagtcgctgattctgccggcgcgcgtgggggattactcgccgaccatgctc
gatgaactgacctctaatggcgaggtgctcatcgtaggcgctggcaaggctggcacgaat
gacccgtggatcatgctgttgccggtggactacgcggcgcagttggcgccgcaggttgac
cctgatgagcaggggctgagcatgctgcaattagcggcgctggaggtcctgcgcggtggc
ggcagttacctgttcaacgatatcgcggcgcaggtgcctggcactgccgaggagctgcgg
gaagcgctgtggcagctggtagaaatgggcctggttagtcccgattcctttgcgccaatc
cgcacacacattgccgcggccggttcgcgctcgggagcaactgcgcaccgcgctaagcga
cgccccacccgttcccggctgcgcatgggacgcacgtcctttgcccaaacgcagggcctc
ggcggggccgcaaccgcccccgacgtggccggccgttgggctgcttccgtgtcaggccaa
ggcgtcgacgcgacgagccgctccgtagcacacggtgaggcttggcttgaccgctatggc
gtgctcactcggggttccgtggtggccgaggacgtgctcggcggcttcgcgctggcctat
aaagtgctctctggctttgaggaatctggcaaggcgatgcgcggctatgtgattgaaggg
cttggcgcggcgcagttttctactcccgcggtcatcgatcgcttgcgtggcatgaacgat
tcgcccgacgtgacggggtggccatctggcactgcgagcactgcggaaattaatacctac
gtgctcgccgcgacggatcccgccaacccgtatggtgcggcccttgcttggccgcaacgc
gatggcgcggacggcggccacggccccacccgtagcgccggtgccctagtggtgctgatg
gacggcctctgcgtggcgcatctaacccgcggtggaaagacgctgacaactttcttggac
gccctgcctgagggcatcgatgctgatgaagtgcttggcaaagtgcttgaaggtctcacg
gagctcatcgccgcagggcgcttgagcccgctggtgattgagaaaatcaacggagcgccc
gcattcgaatcggcaatcgccactcgtttgcgaggccttggcgcaggtatcagtccccgt
ggcgtgcggatctcggccaaggctgcgccgccgcgcacgtcccgccgcatcgaagacaac
cgcagcgacccctggcaaaagcccatggagccacgccgcggccgaagcgtttcggaagct
ctggcggagctaccggatttaagctttgacgatcctcccgaaccaggccgtggcgcgccg
ggtggatttcgtccgcggggcagccgccgctag

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