Corynebacterium simulans: WM42_0671
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Entry
WM42_0671 CDS
T04316
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csp
Corynebacterium simulans
Pathway
csp03420
Nucleotide excision repair
csp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WM42_0671
03430 Mismatch repair
WM42_0671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csp03400
]
WM42_0671
Enzymes [BR:
csp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WM42_0671
DNA repair and recombination proteins [BR:
csp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WM42_0671
MMR (mismatch excision repair)
Other MMR factors
WM42_0671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMO88413
LinkDB
All DBs
Position
complement(686586..689795)
Genome browser
AA seq
1069 aa
AA seq
DB search
MSSQTKLLSPQQLAAALDKPFPPTDEQSKVIEGPLGPKLVVAGAGAGKTETMASRVVYLV
ANGMVRPENVLGLTFTRKAAQQLEQRIRKQLMKLRDSRIVAPDSAAAEALENIAPKVATY
DSYAGDLVREYGLLMPVEPSARIITDAERFAIAHDVVLNYGGKLSASQSVATVTETLLKL
AQSIDNALMDPADIREHARIFTATAYDLEKTRKNGPEFNKDVQRYLDRQQLRVEYLPLVE
ALKEEQAARGVITFGEQMAIAAKLAQSHPAVGEQQSQRFNVVMLDEYQDTSHAQRVLLRS
LFGGVRPGVSVTAVGDPMQSIYGWRGATAENLAAFVEDFPQEDGSPAPKDQLTTSWRNPQ
RALELANDVAAKLFSESAGPRPVDELQPRDGAPEGDIELGYFASEREEHEHIAQHLKSLY
ERYEDPNDFSAAVLVRTNKQSPLIAQALDDAGVPNEIVGLGGLLWQPEIQDLIAVATILV
RPQDTNAALRVLTGPMCGLGVKDLQQLLARQRNLAGGDAAASGRLRWEGGDPVEHLAAQL
AELTEEGTGQILGLADALADLGERERYSAPGLVRMEELSSKLRHLRTYSLSKSLSDLFAD
IEALFNIRTEVLASGTLGGTTHLDAFADVVADFHGDSLSALLDYLSMAREREDGLTPGEV
PAVAGRVQIMTVHKSKGLEWKHVCVLHADSTSYKGQAETFLTFVEKVPGDEDVIELDPDA
TKRSEFGKACEAYKESVRQNQREESARLFYVAMTRTESTLTITGSGTNKVQNKSKKGPYE
YLELLRVKHPDLVQHWDVPASPEEAAAHEVTLEGTFPALEASPHAVQAAETVLEAMDKLP
ELRAGETFELWEQEAGALIEEYAALQAPVVDVELPTELTASDMVSLSSDPIQFARRQRRP
IPFKPNAYAKRGTAFHAWLEDRFGSPALLSEDELPGSDEQPEQDLEALKEAFLSSEWAQR
TPEYVEAPFEITIGDSVVRGRMDAVFREADGTWFIVDWKTGRPPKGADMRAAEIQLAVYA
EAWRRVHSTEDVRAAFFYVHDGYLFEPRDLPTGKRLVELLESSVSASAG
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcagactaaacttttaagcccccagcaacttgctgctgctctggataagcct
ttcccgccgacggatgaacagagcaaggtcatcgagggcccgctcggtccgaagctggtc
gtcgccggcgcgggagctggcaagacggaaaccatggcctcgcgtgtggtctacctcgtg
gccaatggcatggtgcgcccagaaaacgtcttgggtctaacttttacccgcaaggcagct
cagcagcttgagcagcgcatccgcaagcaattgatgaagctgcgagattcccgcatcgtc
gcgccggattctgcagcggcggaagcgctggaaaacattgcgccgaaggtcgccacgtat
gactcttacgcgggtgatttggtacgggaatatggtctgctcatgccggttgagccaagc
gcgcggattattacagacgcagaacgcttcgccatcgcgcacgatgtcgtgctcaattac
ggcggcaagttatctgcgtcccagtcggtggccacggttactgagaccctgctcaagctt
gcacaatccatcgataacgcgttgatggatccggccgatatccgggagcatgcccggatc
ttcactgccaccgcttatgacctagagaagacccgtaaaaacggcccggaattcaacaag
gatgtgcaacggtacctagaccgccagcagctgcgtgtggagtatcttccactcgttgag
gccctgaaggaagaacaagcggcccgtggcgtcatcacctttggcgagcaaatggcaatc
gccgccaagctggcccagagccatcccgcagtaggcgagcagcaaagccagcgtttcaac
gtggtgatgctcgatgagtaccaggacacctcccatgcacagcgcgtgcttcttcgttcc
ctgttcggcggcgtgcgcccaggcgtatccgtaacggccgtgggcgatccaatgcaatct
atctacggttggcgtggcgccacggcagaaaatcttgcggccttcgtagaggatttcccc
caggaagatggctcacctgcaccgaaggaccagctgaccacatcctggcgcaacccacag
cgggctttggaactggcaaacgacgtcgcggccaagctcttttccgagtccgctggccca
cggcctgttgatgagctgcagccgcgcgatggcgcgccggaaggcgatatcgagctgggg
tattttgcctctgagcgcgaggagcatgaacacatcgcccagcatctcaagagcctttat
gagcgatacgaggacccaaacgatttcagcgcggcggtgcttgtacgaacgaataagcaa
tcaccccttatcgcacaagccttagatgacgcaggcgtgccgaatgaaatcgtcggccta
ggcggcttgctctggcagccggagattcaagatctcattgccgttgccaccatcctcgtc
cgcccgcaggacaccaacgccgcactgcgcgtgctcaccgggcccatgtgcgggctgggc
gtaaaggatctgcagcagctgttggcacgtcaacgcaaccttgctggcggcgatgcagcg
gcatcaggacggttgcgttgggagggcggcgacccagtcgagcatctcgccgcccaacta
gcggagctgactgaagaaggcactggacaaatcttgggcctggccgatgctttggcagac
cttggcgagcgcgaacgctatagcgcgccggggctggtgcgcatggaggagctttcttcg
aaactgcgccacctgcgtacctactcgctgtctaagtctttatcggatctcttcgccgac
atcgaagcactctttaatatccgcaccgaggtcctagccagcggcacgttgggcggcacc
acgcacctggacgcttttgccgacgtcgtcgccgatttccacggcgattccctttccgca
ttgctggactatctctcgatggcacgcgaacgcgaagacggccttactcccggcgaagtt
cccgctgtagccgggcgcgtgcaaatcatgaccgtgcacaaatccaaaggcctggagtgg
aagcacgtctgtgtgctccacgctgactccacgagctacaagggccaagccgaaaccttc
ctcaccttcgtggagaaggtccccggtgacgaagacgtcatcgagctggaccctgatgct
acaaagcgttcggaattcggcaaggcatgtgaggcctataaggaaagcgtgcgccagaac
cagcgcgaggaaagcgcgcgccttttctacgttgcgatgacccgcaccgagtccacgctg
acgattacgggttctggaaccaacaaggtccaaaataagtcgaagaaggggccctacgaa
tacctagaactgctgcgcgtaaagcatcctgacttggtccagcattgggacgtgcccgct
agccccgaggaggctgccgcgcacgaggtaacgctcgagggcactttcccagcgctggaa
gctagcccgcatgctgtgcaggcagcggagactgtgctggaggccatggacaaacttccg
gagttgcgcgcaggagaaacctttgagctttgggaacaagaagccggtgctttgatcgag
gaatacgcggcattgcaagcacccgtcgtggacgtagagcttcccaccgagctgacggct
tccgacatggtctcgctcagttcagaccccattcagtttgcgcggcgccaacgacgtccc
attccttttaagccgaatgcatacgccaaacgcggtaccgctttccacgcttggctggaa
gataggtttggttcgccggctctgttgtcggaggatgaactgcccggctccgatgaacag
cctgagcaggacttggaagcattgaaggaggcgttcctttccagcgaatgggcgcagcgc
accccggaatatgttgaggcgccttttgaaatcaccatcggtgattcggtagtacgcgga
cgcatggacgcagtcttccgcgaagcagacggcacctggtttatcgtggactggaaaact
ggccgcccgcctaaaggcgcggatatgcgcgcggcagagatccagcttgcggtctatgct
gaggcatggcggcgcgtgcatagcaccgaagacgtacgcgcggcattcttctatgtccat
gacggctatctctttgaaccgcgggatttgcccaccggaaagcggctggtggagcttctt
gaatcgtcagtttctgcctctgcgggttaa
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