Corynebacterium simulans: WM42_0991
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Entry
WM42_0991 CDS
T04316
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
csp
Corynebacterium simulans
Pathway
csp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WM42_0991 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csp03021
]
WM42_0991 (rpoB)
03400 DNA repair and recombination proteins [BR:
csp03400
]
WM42_0991 (rpoB)
Enzymes [BR:
csp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WM42_0991 (rpoB)
Transcription machinery [BR:
csp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WM42_0991 (rpoB)
DNA repair and recombination proteins [BR:
csp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WM42_0991 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AMO88733
LinkDB
All DBs
Position
complement(1005159..1008653)
Genome browser
AA seq
1164 aa
AA seq
DB search
MLEGPILAVSRQTKSVANIPGAPKRYSFAKINEPIAVPGLLDLQLDSFAWLIGSPEWRER
EQAERGPEARVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEPVKNTVDECKEKDINYSA
PLYVTAEFINNDTQEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPGVYFDQTI
DKSTERPLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWSEEQIRER
FGFSELMMSTLESDGVANTDEALLEIYRKQRPGEQPTRELAQSLLDNSFFRAKRYDLAKV
GRYKVNRKLGLGGDHDGLMTLTEEDIAVTLEYLVRLHVGEREMTAPNGETIAIHTDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDHNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGP
NIGLIGSLASYARVNAFGFIETPYRKVVDGKVTDEVEYLTADEEDKYAIAQAEIEKEADG
TIVGTRIEVRLKDGDIGVTDASGVDYVDVSPRQMVSVATAMIPFLEHDDANRALMGANMQ
RQAVPLVRSEAPFVGTGMEQRAAYDAGDLIITPKAGIVENVTADLITIMDDEGQRDTYML
RKFERTNQGTNYNQTPLVELGQRVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYE
DAIILNQRIVEDDVLTSIHIEEHEIDARDTKLGAEEITREIPNVSDDVLRDLDERGIIRI
GADVRAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGENGKVIGVAR
FSREDDDDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMPFMADGTP
VDVILNTHGVPRRMNIGQVLEVHLGWLAHAGWKVDVDDPANAELLKTLPEELYDVPAGSL
TATPVFDGASNEEIGRLLASSRPNRDGDVMVDEHGKAQLFDGRSGEPYKYPVSVGYMYML
KLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSTDGTPMELSGSD
DDDMDSPSLGINLSRDERADADIA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagaccaagtcagtggccaatatccct
ggagccccgaagcgatactcgttcgcgaaaatcaacgagcctatcgccgtcccgggcctc
ctcgatctacaactcgattccttcgcatggctgatcggctcgccagagtggcgcgagcgc
gagcaggctgagcgcggtcccgaggctcgcgtcaccagcggcctcgaggacatccttgag
gaactgtctccgattcaggactactcgggcaacatgtccttgtccctgtcggagcctcgc
ttcgagccggtgaaaaacaccgtcgacgagtgcaaggaaaaggacatcaactactccgcg
ccgctgtacgtgaccgcagagttcatcaacaacgacacccaggagatcaagtctcagacc
gtcttcatcggcgacttcccgatgatgacggacaagggtacgttcatcgttaacggtacc
gagcgtgtcgtcgtttcccagctcgttcgctccccgggcgtctacttcgatcagaccatc
gataagtccaccgagcgtccgctgcactccgtgaaggtgattccttcccgcggtgcatgg
ctggaattcgacgtcgacaagcgcgataccgtcggcgtccgcatcgaccgtaagcgtcgc
cagccggtaaccgtactgctcaaggcccttggttggtccgaggaacagatccgtgagcgc
ttcggcttctccgagttgatgatgtccaccctcgagtccgatggtgtggcaaacactgac
gaggctttgctggagatctaccgcaagcagcgtccgggcgagcagccgacccgcgagctc
gcgcagtccctgctggataactccttcttccgtgcaaagcgctacgacctcgcaaaggtg
ggccgttacaaggtcaaccgcaagctgggtctgggcggtgaccacgatggtctgatgacc
ctgaccgaggaagacatcgctgtcaccctcgagtatctggtacgcctgcacgtaggtgag
cgtgagatgaccgctccgaacggcgagaccatcgccatccacactgacgacatcgaccac
tttggtaaccgtcgtctgcgtaccgtcggcgagctcatccagaaccaggtccgcgttggc
ctgtcccgtatggagcgcgtcgttcgcgagcgcatgactactcaggatgcggagtccatc
actccgacctcccttatcaacgtgcgtccggtttctgctgctatccgcgagttcttcggt
acctcgcagctgtcccagttcatggaccacaacaactccctgtctggtctgacccacaag
cgccgtctgtctgcgctgggcccaggcggtctgtcccgcgagcgcgccggcattgaggtc
cgagacgtgcacgcttctcactacggccgtatgtgcccgattgagactccggagggcccg
aacattggtctgattggctccctggcctcctacgctcgcgtcaatgctttcggcttcatt
gagaccccataccgcaaggttgttgacggcaaggtcaccgacgaggtcgagtacctcacc
gctgatgaggaagataagtacgcaattgcgcaggcggaaatcgagaaggaagctgacggc
accatcgtcggcacccgtatcgaggtccgcctgaaggacggcgacatcggagttaccgac
gcttccggcgtcgactacgttgacgtttccccgcgccagatggtttccgtggcaaccgcc
atgattccgttcttggagcacgacgacgctaaccgtgcgctgatgggcgctaacatgcag
cgccaggcagtgccgctggtgcgctccgaggcacctttcgttggtaccggtatggagcag
cgcgctgcatacgacgccggcgacctcatcatcaccccgaaggctggcatcgtagaaaac
gtcaccgccgatctcatcaccatcatggatgacgagggtcagcgtgacacctacatgctg
cgcaagttcgagcgcaccaaccagggcaccaactacaaccagaccccgctcgtcgagctg
ggccagcgcgtagaggccggccaggttctggctgacggcccgggtacccacaacggcgag
atgtccttgggccgcaacctgttggttgccttcatgccttgggaaggccacaactacgag
gatgcaatcatcctgaaccagcgcatcgtcgaggacgatgttctgacctccatccatatc
gaggagcacgagatcgatgctcgcgataccaagctgggtgccgaggaaatcacccgcgag
atcccgaacgtctccgacgatgttctgcgcgacctcgacgagcgcggcatcatccgcatc
ggtgcggacgtccgcgcaggtgacatcctcgtcggtaaggtcaccccgaagggtgagacc
gagctgaccccggaggagcgcctgttgcgcgccatcttcggtgagaaggcacgtgaggtt
cgcgatacctcgatgaaggttccacacggtgagaacggcaaggttatcggcgttgcgcgc
ttctcccgcgaggacgacgacgatctggcaccgggcgtcaacgagatgatccgcgtttac
gtcgctcagaagcgcaagatccaggatggcgataagctcgctggccgtcacggcaacaag
ggtgtcgtgggcaagatcctgccgccagaggacatgccattcatggctgacggcacgcct
gtcgacgtcatcttgaacacccacggtgttccgcgtcgtatgaacatcggccaggtcctc
gaggtccacctcggctggcttgcccacgccggctggaaggtcgacgttgatgacccagct
aacgctgagctgctcaagaccctgccggaagagctttacgacgtcccggctggttccctg
accgcaaccccggtcttcgacggtgcttccaacgaggagatcggccgcttgctggcttcc
tcccgcccgaaccgcgacggcgacgtcatggttgacgagcacggtaaggcacagcttttc
gatggccgctctggcgagccgtacaagtacccggtttccgtcggctacatgtacatgctc
aagctgcaccacctggtcgacgaaaagattcacgctcgttccaccggcccttactccatg
attacccagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggcgagatg
gaggtgtgggcaatgcaggcttatggcgctgcctacaccctgcaggagctgctgaccatc
aagtctgacgacgtcgtcggccgtgtgaaggtctacgaggcaatcgtgaagggcgacaac
atcccggatccaggtatcccggagtccttcaaggtcctcctcaaggagctgcagtcgctg
tgtctgaacgtggaggttctctccaccgacggcacgccgatggagctgtctggctctgac
gatgacgacatggatagcccgtcgctgggtattaacctttcgcgcgacgagcgcgctgac
gccgacatcgcatag
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integrated database retrieval system
