Corynebacterium simulans: WM42_1558
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Entry
WM42_1558 CDS
T04316
Name
(GenBank) formamidopyrimidine-DNA glycosylase H2TH domain protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csp
Corynebacterium simulans
Pathway
csp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WM42_1558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csp03400
]
WM42_1558
Enzymes [BR:
csp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WM42_1558
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WM42_1558
DNA repair and recombination proteins [BR:
csp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WM42_1558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AMO89282
LinkDB
All DBs
Position
complement(1589168..1589821)
Genome browser
AA seq
217 aa
AA seq
DB search
MHFSADAPEHIIYIHLGLIGSLRFEPLDDVWGQIRLRVESDDLAANLRGPQWCRLITDAE
YDVALAKIGQDPIREDASPADLWPRVHRSSRSIGSLLMDQHLFAGVGNIYRAEVLFRQNI
SPFIAGNELDRHEFDVIWEDLVELMRAGVPTARIDTVRPEHTPEAMGRAPRKDDHGGEVY
VYRRAGMPCYICGEPIAEKKLEGRNLFWCPTCQNAPA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcacttttccgccgatgcgccagagcacatcatctatattcacctcgggttgatcggc
agcttgcgctttgagcctttggacgatgtctggggccagattcgcctgcgcgtcgaaagc
gatgacctagctgccaacctccgcgggccgcagtggtgccggctcattacggatgctgag
tatgacgtcgcgctcgccaagattggccaggaccccatccgcgaggacgcatcaccggcc
gacctttggccgcgggtgcacaggtcgagccgcagcatcggctccttgctgatggatcag
catctctttgccggagtcggcaacatctaccgcgccgaggttttattccgccagaacatc
tcaccttttattgccggcaatgaactggaccgccacgaattcgatgtcatctgggaggac
ctggtagaactcatgcgcgccggcgtgcccaccgcccgcatcgacacggtccgcccggag
cacacgccagaggccatgggccgcgcgccacgcaaggatgaccacggcggcgaggtttat
gtctaccgccgcgccggcatgccttgttatatctgcggcgagcccatcgcagaaaagaag
ctcgaaggcaggaacctgttctggtgccctacctgccagaacgctccagcctaa
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