Corynebacterium simulans: WM42_2432
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Entry
WM42_2432 CDS
T04316
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csp
Corynebacterium simulans
Pathway
csp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WM42_2432 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csp03019
]
WM42_2432 (pnp)
03016 Transfer RNA biogenesis [BR:
csp03016
]
WM42_2432 (pnp)
Enzymes [BR:
csp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WM42_2432 (pnp)
Messenger RNA biogenesis [BR:
csp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WM42_2432 (pnp)
Transfer RNA biogenesis [BR:
csp03016
]
Prokaryotic type
tRNA degradation factors
WM42_2432 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
DUF4852
Methyltransf_7
Importin_rep_6
Motif
Other DBs
NCBI-ProteinID:
AMO90129
LinkDB
All DBs
Position
2526011..2528251
Genome browser
AA seq
746 aa
AA seq
DB search
MSARNAVEFNIDEEFGITEAIATLDNGDFGTRTIRFETGQLARQAGGSVTTYLDEDTMLL
STTTASNQPREGFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTEAILACRLIDRPLRP
TFVKGLRNEVQVVVTVLSMAPEEYYDVIAINGASASTQLSGLPVSGAVGGVRMALIADDK
HPEGQWVAFPNHEQHERALFEMVVAGRIVKKGRKEDVAIMMVEAGAGINVAERIKEGAPA
PQESTVAAGLEAAKPFIKTLCEAQAGLAERTAKETQEFPLFPPYTDDVFAAVEKAASKKL
EKLMTIPGKQDRDDATNEYMEQVEADLLEKFEDEDASKQIRAAYNAVMKAIVRKKILTEG
FRIDGRGVTDIRDLGVEVDLIPRAHGSSLFERGETQILGVTTLDMLKMEQQIDSLTPVTG
KRYMHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVIPSREDFPYAIRQVSEALG
SNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSGEVDGKEKFVALTDILGAEDAFG
DMDFKVAGTSEFITALQLDTKLDGIPSKVLAKALEQARDARATILETMAEVIEGPDEMSG
LAPKITSVKIPVNKIGELIGPKGKTINSITEETGAEVSIEEDGTVYISAATGEAADAAIE
KVNSIANPQLPKVGERFLGTVVKTVAFGAFVSLAPGRDGLIHISKLGGDERIEKVEDVVN
VGDKIQVEIADIDNRGKISLVPVEEN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctagaaacgctgttgagttcaacattgatgaagaattcggtatcaccgaagca
atcgccacccttgacaatggcgattttggcacccgcaccatccggtttgagactggccag
ctggctcgtcaggcgggcggctctgtcaccacttacctggacgaggacaccatgcttctg
tccaccaccaccgcctccaaccagccgcgtgagggcttcgacttcttcccgctgaccgtg
gacgtcgaggagcgcatgtacgcagccggcaagattccgggctccttcttccgccgcgaa
ggccgtccctccaccgaagccatcctggcctgccgcctgatcgaccgtccactgcgcccg
acctttgtcaagggcctgcgcaacgaggtgcaggtcgttgtcacggtgctttccatggca
ccggaggagtactacgacgtcatcgccatcaacggtgcatctgcttccacccagctttcc
ggcctgccggtatccggcgccgtcggcggcgtgcgcatggcgcttatcgctgatgacaag
catccagaaggccagtgggttgcgttcccgaaccacgagcagcacgagcgtgcgctgttc
gagatggtcgtcgccggccgcattgtgaagaagggccgcaaggaagacgttgccatcatg
atggttgaggcaggcgctggtatcaacgttgcagagcgcatcaaggaaggcgcaccggca
ccgcaggaatccaccgttgcagcaggccttgaagcagcaaaaccattcatcaagaccctg
tgcgaggcgcaggcaggtctggctgagcgcacagcgaaggaaacccaggagttcccactc
ttcccgccgtacaccgatgacgtatttgccgccgtggaaaaggcagcctccaagaagctg
gagaagctgatgaccatccctggcaagcaggaccgtgacgacgctaccaacgagtacatg
gagcaggtcgaggcggatctcctcgagaagtttgaggatgaggatgcctccaagcagatc
cgcgctgcgtataacgctgtcatgaaggccatcgtgcgcaagaagatcctcaccgagggc
ttccgtatcgacggccgtggcgtcaccgacatccgtgacttgggcgttgaggttgacctc
atcccacgcgcacacggttcctcccttttcgagcgcggtgagacccagatcctgggcgtt
accaccctggacatgctcaagatggagcagcagatcgattccctgaccccggtcacgggc
aagcgctacatgcaccactacaacttcccgccgtactccaccggtgagaccggccgcgtt
ggctccccaaagcgccgcgagatcggccacggtgctcttgccgagcgcgccctgctgccg
gtcatcccttcccgcgaggacttcccgtacgccatccgtcaggtctctgaggcgctaggc
tccaacggttctacttccatgggctccgtttgtgcttccacgctgtccctgtacaacgct
ggtgtgccgctgaaggctccggttgcaggtatcgcaatgggcctggtttccggtgaggta
gacggcaaggagaagttcgtcgctctgactgacattttgggcgccgaggacgcattcggc
gacatggacttcaaggtcgcaggtacctccgagttcatcaccgcgctgcagctggacacc
aagctcgatggcatcccatccaaggtcctggctaaggcactggagcaggcacgtgacgcc
cgcgccaccatcttggagaccatggctgaggtcatcgaaggcccagacgagatgtctggt
ctggctccgaagatcacttccgtgaagattccggtcaacaagatcggcgagctcatcggc
ccgaagggcaagaccatcaactcgattaccgaggagaccggcgctgaggtttccatcgag
gaagacggcaccgtctacatctctgccgcaactggtgaggctgccgacgccgcgatcgag
aaggttaactccatcgctaacccgcagctgccaaaggtcggcgagcgcttcctcggcacc
gtcgttaagaccgtcgcctttggtgcattcgtctccctggccccgggccgcgatggcctc
atccacatctcgaagctcggcggcgacgagcgcatcgagaaggtcgaggacgttgtcaac
gtcggcgataagattcaggtcgaaatcgcagacatcgacaaccgcggcaagatctccttg
gttccggtcgaggaaaactag
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