Corynebacterium simulans: WM42_2438
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Entry
WM42_2438 CDS
T04316
Name
(GenBank) putative ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
csp
Corynebacterium simulans
Pathway
csp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WM42_2438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csp03019
]
WM42_2438
Messenger RNA biogenesis [BR:
csp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WM42_2438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AMO90135
LinkDB
All DBs
Position
2532244..2534349
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AA seq
701 aa
AA seq
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MTEPRNRSRKVTRKAGPPAETESASNEAASPVFQAPSNSEPKQESGDKKSNNNGNSENSN
GGNRRSRSRGSRGGRGRGRGGNNAENNGINNNGNNGNNNGGRGNRNNNRGRRNVPKSMQG
ADLTKRLPQPPKQPKDALRIYALGGISEIGRNMTVFEYQDELLIIDCGVLFPSSGEPGVD
LILPDFGPIEKKIDKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKE
HRQKPKFVEVNEKSDVNYGPFRLRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPL
DNRPTDLPALSRYGDEGVDLMLCDSTNANIPGVSASEGDIPATFRRLVSNAKQRVIIASF
ASNVYRVQAAIDAAVYAGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIVPIDEAAKMAPH
KVLLITTGTQGEPMAALSRMARREHRQITVRDGDLIIFSSSLIPGNEEAVYGVMNMLSQI
GAEVVTNKEAKVHASGHGYGGELLFLYNAARPKNAMPVHGEWRHLRANKELAVSTGVDRD
RVVLAQNGVVVDLRKGRAEVVGQITVGNLYVDGVSMGDVDADTLADRTNLGAGGVVSITC
VIDNRTSRLLEKPAVSTTGFSDDDRGIVPEVAEIVENTMNDLAAEGENDTYRMVQKVRRK
VTKLMDSKYKREPVILPTIIPTNSGPLLADDDEVEASRESL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccccgtaaccgttcccgcaaggttacccgcaaggcgggcccaccagcggaa
accgagtccgcctccaacgaggcggcttcgccggtttttcaggcaccgagcaactcggag
ccaaaacaggaatccggtgacaagaagtccaataacaacggcaattccgagaactcgaac
ggcggcaaccggcgctcgcgttcccgtggctcccgcggtggtcgcggtcgcggccgcggc
ggcaacaacgccgagaacaacggaattaacaacaacggcaataacggcaataacaatggt
ggccgtggcaaccgcaacaacaaccgcggccgccgcaacgttccgaagtccatgcagggc
gcggatctgaccaagcgcctgccgcagccgccgaagcagccgaaggatgccctgcgcatc
tacgctctgggcggtatttctgagatcggtcgtaacatgaccgtctttgagtaccaggac
gagctgctcatcattgactgtggcgtgctcttcccttcctccggtgagccgggcgtggac
cttatcttgccggactttggcccgatcgaaaagaagatcgacaaggtcaaggcgctcgtg
gttacccacgctcacgaggaccacattggtgctatcccgtggcttctcaagctgcgcccg
gatatcccaatcgtggcatcgcgctttaccattgccctgattgcggcgaagtgtaaggag
caccgccagaagccgaagttcgttgaggtcaacgagaagtccgatgtgaactacggtccg
ttccgtctgcgcttctgggcagttaaccactccgttccggatgcactgggcatcatgctg
ggcaccccggctggcaacatcatccacaccggtgacatcaagctggaccagaccccgctg
gataaccgcccgaccgaccttccggcgctgtctcgctacggcgacgagggcgtcgacctc
atgctctgcgattccaccaacgcgaacatcccaggcgtttccgcatctgagggcgatatc
ccggctaccttccgccgcttggtctccaatgccaagcagcgcgtcatcattgcgtccttc
gcctcgaacgtctaccgcgtgcaggcggctatcgacgccgccgtttacgctggccgtaag
gtcgcgttcaacggccgttccatgatgcgcaacatggaaatcgccgagaagatgggcttc
cttaaggttccgcgcggcaccatcgtcccgatcgatgaggctgccaagatggcaccacac
aaggtccttctgattaccaccggtacccagggcgagccgatggcggcactgtcgcgcatg
gcgcgtcgcgagcaccgtcagatcaccgttcgcgatggcgatctgatcatcttctcttcc
tccctgattccgggtaacgaagaggccgtctacggtgtgatgaacatgctctcccagatt
ggtgccgaggttgtcaccaacaaggaggctaaggttcacgcttccggccacggctacggc
ggcgagcttttgttcctctacaacgctgcacgtccgaagaacgctatgccggtccacggc
gagtggcgccatttgcgtgcgaacaaggaactggctgtctctactggcgtcgaccgcgac
cgcgtggttctcgcccaaaacggcgtcgttgtagacctgcgcaagggtcgtgccgaggtc
gttggccagatcacggtgggcaacctctacgtcgatggtgtttccatgggtgacgtcgat
gccgataccttggcagaccgcaccaacctcggtgctggcggcgttgtctccatcacttgt
gtcatcgacaaccgcacctcgcgtctgctcgaaaagccagcggtttccaccacgggcttc
tccgacgacgaccgtggaatcgtgccagaggttgccgagatcgtggaaaacaccatgaac
gatctcgctgccgaaggcgagaacgacacctaccgcatggtccagaaggtccgccgcaag
gtcaccaagctcatggattccaagtacaagcgtgagccggtcatcttgccgaccatcatt
ccgaccaactctggtccgttgcttgcagacgacgatgaggtagaggcttcccgcgagtcc
ctttaa
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