KEGG   Corynebacterium simulans: WM42_2608
Entry
WM42_2608         CDS       T04316                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
csp  Corynebacterium simulans
Pathway
csp03030  DNA replication
csp03410  Base excision repair
csp03420  Nucleotide excision repair
csp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WM42_2608 (polA)
   03410 Base excision repair
    WM42_2608 (polA)
   03420 Nucleotide excision repair
    WM42_2608 (polA)
   03440 Homologous recombination
    WM42_2608 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csp03032]
    WM42_2608 (polA)
   03400 DNA repair and recombination proteins [BR:csp03400]
    WM42_2608 (polA)
Enzymes [BR:csp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     WM42_2608 (polA)
DNA replication proteins [BR:csp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WM42_2608 (polA)
DNA repair and recombination proteins [BR:csp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     WM42_2608 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WM42_2608 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AMO90297
LinkDB
Position
2705536..2708148
AA seq 870 aa
MLIDGHSMAFRAFYALPAENFATSGGQHTNAVYGFLSMLSNIIAEEKPEFVGVAFDVGRK
TFRTEMFPEYKAQREAAPEEFRGQVELIREVLGTLGITTLSRENFEADDIVATLATQADN
YETLIVTGDRDYLQLVNEDTTVLYPMRGVSTLHRFTPAAVEEKYGLTPQQYPDFAALRGD
PSDNLPSVPKVGEKTATKWILQYGTLEGLIEHAAEIKGVAGQNFRDRIEQVRMNRKLTQM
ITDMDLGVGPDDLAFQGATVSEVAEKFDELEFGTNLRERVLEAIPNDGGGAPAVEEAPTQ
EIKVVDKPLAQWLEGKEHVAVFVTGDSRPGQGDASALALVDADFEGMQVELGELSAEDDA
ALAAWFASSAPKYFHEAKAAFHMLAGRGIELRGIAHDTAIAAYLLRPGQRTYDLPDVYQR
HLKKTLAQASDQLSLLDDSSLVDQAGAIMELAVALSKQLQEIDSFELYTDLELPLVGILA
RMEATGIAVDVEILETQRDAFIEQVAEQERAARELAGDETLNLNSPKQLQTVLFETFEMP
KTKKTKTGYSTAAKEIEQLAVNHPHPFLDHLLAHREYQKMKTTLEGLIKTVQPDGRIHTT
FNQTVASTGRLSSTEPNLQNIPVRTEAGRQIRSAFIVGTEFETLMTADYSQIEMRVMAHL
SEDPGLIEAYREGEDLHNYVGSKVFDVPVDEVTSELRRRVKAMSYGLVYGLSAFGLSQQL
GIPAREAKEIMESYFERFGGVKRYLDNVVEQARKDGYTATVFGRRRYLPELNSDNRLARE
NAERAALNAPIQGTAADIIKVAMIRVDRALEGMRSRVLLQVHDELVVEVAPGEADKVREI
LEREMDSAIELNVPLEVSAGAGKDWDAAAH
NT seq 2613 nt   +upstreamnt  +downstreamnt
ttgcttatcgacggccactccatggccttccgcgctttttatgcgctgccggcagaaaac
ttcgccacctccggcggccagcacacgaatgcggtgtatggatttttgtccatgctctcc
aacatcatcgccgaggagaagccggagttcgtgggcgtggctttcgacgtcgggcgcaag
accttccgtaccgagatgttcccggagtacaaggcccagcgcgaggccgcgcccgaggag
ttccgcggccaggtagagctcatccgcgaggtgctcggcaccctgggtatcaccacgcta
tcccgcgagaacttcgaggccgatgacatcgtggccacgctggctactcaggccgataat
tatgaaaccctcatcgttaccggcgaccgcgactacctgcagctggtcaacgaggacacc
accgtgttgtaccccatgcgtggtgtttccaccctgcatcgctttaccccggccgcggtg
gaggagaagtacggtctgactccgcagcagtatccggatttcgcggccctgcgcggcgat
ccttccgataacctgccgagcgttcccaaggtgggcgagaagacggccaccaaatggatc
ctccaatatggcaccctcgaggggcttatcgagcacgccgcggaaatcaagggcgtggcc
ggtcagaacttccgcgatcgcatcgagcaggtgcgcatgaatcgcaaactcacgcagatg
atcacggacatggatttaggggtcggcccagacgatctggctttccagggtgcaaccgtt
agcgaggtggccgagaagttcgacgagctcgagttcggcaccaatctccgcgagcgcgtg
ctggaggctatcccgaacgatggcggtggggcgccagccgtggaggaggcaccgacgcag
gagattaaggtcgtcgacaagcctttggcccagtggttggagggcaaagagcacgtcgcg
gtctttgtcactggtgactcccgccccggccagggtgacgcgagcgcactcgcgcttgtc
gacgccgactttgaaggcatgcaggtcgaacttggcgaattgagcgcggaggatgacgcc
gcacttgccgcctggtttgcttcttctgcgccgaagtattttcacgaggccaaggccgct
ttccatatgctggcaggccgcggcatcgagctgcgtggcatcgcgcacgataccgcgatc
gctgcctacttgctgcgcccgggccagcgcacctatgacctgccggatgtctatcaacgt
cacctgaagaagactctcgcccaggccagcgaccagctctcgctgctggatgattcttcc
ctagtggaccaggcgggtgccatcatggagctggctgtggcgcttagcaagcagctgcaa
gagatcgattccttcgagctttataccgacttggagctgccgctcgtgggcattctcgcg
cgcatggaggccaccggtatcgccgtggacgtggagattctagaaacccagcgcgatgcc
ttcatcgagcaggttgccgagcaggagcgcgccgcccgcgagctggctggcgacgagacg
ctgaacttgaactcgccaaagcagctgcagaccgtgctcttcgagaccttcgagatgccg
aagacgaagaagaccaagacgggctattccaccgcggccaaggagattgagcagctggcg
gtcaaccacccgcacccgttcctcgatcacctgcttgctcaccgcgagtatcagaagatg
aagaccaccctggaaggcctcatcaagaccgtgcagccggacggtcgcatccacaccacc
ttcaaccagacggtggcttccacgggccgactttcctccaccgagccgaacctgcagaac
atcccagtgcgcacggaggcagggcgccagattcgctctgcgttcatcgtgggcacggag
ttcgagaccttgatgacggccgattattcccagattgagatgcgcgtgatggctcacctg
tccgaggatccggggcttatcgaggcctatcgcgagggtgaggatctgcacaactacgtc
ggctcgaaggtcttcgacgtgccggtcgatgaggtgacctcggagctacgccgccgtgtc
aaggcgatgtcttatggtctagtctatggcctttccgcgttcggcttgtcccagcagctg
ggcatcccggcccgcgaggccaaggagatcatggaaagctatttcgagcgtttcggtggc
gtgaaacgctacctcgacaacgtcgttgagcaagcccgcaaggatggctacaccgcgacc
gtcttcgggcgccgtcgctacctgccggagctgaactctgataatcgcctcgcgcgtgag
aacgccgaacgtgcagcgctgaacgctccgattcagggcacggctgcggacatcatcaag
gtcgccatgattcgcgtggatagggcgcttgagggaatgcgctcccgtgtgctgctgcag
gtccacgacgaacttgtggtggaagtcgccccaggcgaggccgacaaggtccgcgagatt
ctagaacgcgagatggattcggccatcgagctcaacgtcccgctcgaggtctccgccggt
gccggtaaggattgggatgccgcagcgcactaa

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