Corynebacterium simulans: WM42_2621
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Entry
WM42_2621 CDS
T04316
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
csp
Corynebacterium simulans
Pathway
csp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WM42_2621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csp03400
]
WM42_2621
DNA repair and recombination proteins [BR:
csp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WM42_2621
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WM42_2621
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
APS_kinase
nSTAND3
AAA_21
AAA_33
nSTAND1
AAA_22
nSTAND_NTPase5
DnaJ_CXXCXGXG
AAA_18
SLFN-g3_helicase
NACHT
Viral_helicase1
CCDC24
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AMO90310
LinkDB
All DBs
Position
2720217..2723054
Genome browser
AA seq
945 aa
AA seq
DB search
MADRLVVRGAREHNLKGVDIDLPRDKMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVEFIDGLSPAVSIDQKSTNHNPRSTVGTITEIYDYLRLLFSRAGTPH
CPKCDAVIERQTPQQIVDTVLELEEKLKFQVLAPVVRHRKGEFVDLFADLASQGFSRVRV
DGEVYQLTEPPTLKKQIKHDIDVVVDRLQVKASQKQRLTDSVETALRLSDGLVTLDFIDR
PELTHTYSEKAACPNGHTLTIEEYEPRAFSFNAPFGSCPECDGLGTRLEVDVDLLIPDPD
APAVDAIQPWHSSPNSRYFVKLVEGLGKTLGFDPQTPVSQLTKQQRDALIYGTDVEVNVR
YKNRYGRQRNWTAPFEGAIGFLERKLEQADSESQKDRLLQYTRRVACNTCNGTRLRPEIL
AVRLASTAHGEKSIAGLSALSIEEAAEFLDSLVLGHREEIIAGAVLKEIQARLRFLLDVG
LNYLTLDRGASTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIATLKRL
RDIGNTLIVVEHDEDTIREADWLVDVGPRAGEYGGEVVYQGEPAGIMDKEESLTGQYLSG
KRVLAVPDKRREIDPERKLKVVGARENNLKGIDVEIPLGVLCCITGVSGSGKSTVVNQIL
AKTLSNKLNRARQVPGRAKRVEGVEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKIRNLF
AETQEAKVRGYKPGRFSFNVKGGRCEACQGDGTLKIEMNFLPDVYVPCEVCEGARYNRET
LEVLYKGKNIAEVLNMPISEAAEFFEPITSIHRYLATLVDVGLGYVRLGQAATTLSGGEA
QRVKLAAELQKRTKGRTVYILDEPTTGLHFEDIRKLMLVIQGLVDKGNSVLIIEHNLDVI
KAADWIVDMGPEGGNGGGRVVAEGTPEDVAKVEGSYTGQFLKELL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatcgtttggtcgtacgcggtgctcgcgagcacaatctcaagggcgtcgatatc
gacctgccgcgcgacaagatggtggtctttaccggcctttccggttccggtaaatcatcg
ttggcttttgatactatcttcgcggaaggccagcggcgttatgttgaatcgctgagctcc
tacgcccgcatgttcctaggtcagatggacaagcctgacgtcgaattcattgatggcctt
tctcccgcggtctcaattgaccagaagtccaccaaccacaacccgcgttctacggtgggc
accatcacggagatctacgactatctgcgccttttattctcccgcgcgggcacgccgcat
tgcccgaagtgcgacgccgtgattgagcgtcagaccccgcagcaaatcgtggacacagtg
cttgaactcgaggaaaagctaaagttccaggtcctggctcccgtggtgcgacaccgcaag
ggcgagtttgtggatctctttgccgatcttgcatctcagggtttctcccgcgtgcgggtt
gatggcgaggtttatcaattaactgagccgccgacgctgaagaagcagatcaagcacgat
attgacgtggtggtggaccgtttgcaggtcaaggcctcacagaagcagcgtctgaccgat
tctgtcgaaactgcgctccgcctgtcagacggtctcgttaccctcgacttcatcgatcgc
cccgagctcactcatacctactcggagaaggccgcctgccccaatggtcacaccctaacc
atcgaggaatacgagccgcgtgcgttttccttcaatgcgcctttcggctcctgtccagaa
tgtgacggtctaggtacccgacttgaggtcgacgtagatctgctgattccggatcctgac
gctccagcagtcgacgccatccagccgtggcattccagcccgaattcgcgctacttcgtc
aaactcgtcgagggccttggtaagacgttgggctttgatccgcagactccggtttcacag
ctgacaaagcagcagcgcgatgcgctgatttatggcaccgacgtggaagtaaacgtgcgc
tataagaaccgctacggcaggcagcgcaactggaccgctccctttgagggtgcgatcggc
ttcttggagcgcaagcttgagcaggccgattccgagtcgcagaaggaccgcttgctgcag
tacacccgccgggtggcttgcaatacctgtaatggcacgcgcctgcgcccggagatcttg
gctgtgcggcttgcctccaccgcgcacggcgagaagtccattgcggggctgtccgcgctg
tctatcgaagaggccgcggagttccttgactcgctggtactggggcaccgcgaggaaatt
atcgctggcgcagtattgaaggagattcaggcccgcctgcgattcctgctcgacgtgggt
ctgaattacctcaccttggatcgtggagcttccacgctttctggtggggaggcgcagcgc
atccgcctggcaacccagattggttcgggtctggctggcgtgctgtatgtgctggatgag
ccctccattggtctgcaccagcgtgacaatcagcgtctcatcgctactttgaagcgcctc
cgtgacatcggcaatacgttgattgtggttgagcacgatgaagacaccatccgcgaggcc
gactggcttgttgatgttggcccgcgcgccggcgagtacggcggcgaggttgtctatcaa
ggtgagcccgccggcatcatggataaggaagaatcgcttacgggtcagtatctgtctggc
aagcgtgtgctggcggtgccggataagcgtcgtgagattgaccctgaacgcaagctcaag
gtagtcggcgctcgggaaaacaacttgaagggcatcgacgttgagattccgctcggcgtg
ctttgctgcatcaccggtgtatcgggttccggcaagtccacggtggtcaaccagattctg
gccaagactctgtccaacaagctcaaccgtgcgcgccaggtgccaggccgcgccaagcgc
gtcgagggcgtcgagcacctcgacaagctggtgcaggtggaccagagcccgatcggccgt
accccgcgttccaacccggctacctataccggtgtattcgacaagatccgcaacctcttt
gcggagacccaagaggcaaaggtgcgcggatacaagccaggccgtttctcctttaacgtc
aagggtggtcgctgcgaggcttgccagggtgacggcacgttgaagatcgagatgaacttc
ctgccggacgtttatgtcccgtgtgaggtctgtgagggtgcgcgctataaccgtgaaacc
ctggaggtcctctacaagggcaagaacatcgctgaggttctcaacatgcctatctccgag
gccgccgagttcttcgagccgattacctcgattcaccgttacctcgccacgcttgtcgac
gtcggactgggttatgttcgcctggggcaagcggccaccacgctgtctggcggcgaggcg
cagcgcgtaaagcttgctgctgagctgcaaaaacgcaccaaggggcgtaccgtctacatt
ttggacgagccaaccacgggcctgcacttcgaggacattcgcaagctcatgctggttatc
caagggctggtggacaagggcaactcggttcttatcatcgagcacaaccttgacgtgatt
aaggccgctgactggatcgtggacatgggtcccgaaggcggaaatggcggcggtcgcgtc
gtagctgagggcactccagaagatgtcgcaaaggtggaaggctcctatacaggccagttc
ctgaaggagctcctgtag
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