Campylobacter sputorum: CSF_0753
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Entry
CSF_0753 CDS
T04992
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cspf
Campylobacter sputorum
Pathway
cspf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cspf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSF_0753 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspf03400
]
CSF_0753 (mfd)
Enzymes [BR:
cspf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSF_0753 (mfd)
DNA repair and recombination proteins [BR:
cspf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
CSF_0753 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
CarD_TRCF_RID
ResIII
UvrB_inter
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ASM36636
LinkDB
All DBs
Position
747609..750569
Genome browser
AA seq
986 aa
AA seq
DB search
MQSEIYEFCLEKNDFDIIVCDDDKEASVISDVVSYCGIEAYRLPDFRASFGDDLRPFNAE
LFEISSVLNSFYKSSSKKLLISPIRTLLNKLPSKSHFHTINLSFADKIDLNSFKEEILRF
GYNIVDIVESEAEVSFRGEIIDIFCIGKEKPFRVLLNDDEIESIRYYNPSTQKSDKIELE
SIEISPFLAYLSKNEYENVTNKISQMQSDAFVNDLNSLGFWAIEGFENYFDKFKVILAND
INLQDIITDTDLSFLKKLPVIKEAKNFKDLNTTLSKEFLEFHKDKKITILSKNDGIFKSY
ELDCFSNVNLKISPYVVNLISKDEIILSLNKFEKKKRVRKSSLVLDELNSGDLVVHEDYG
IGKFESLELVEILGAKREFVAIIYQNNDKLLLPVEHLNKIDRYIAGSGNIAVLDKLGKGS
FAKIKEKVRQKLFAIASNIIALAAKRELIKGVKIECDSLEYIKFMQSAGFEYTKDQIKAI
DDISKDLASGKVMDRLISGDVGFGKTEVAMNAIFKTIKSGYSVLFFVPTTLLSSQHYTTL
KERFKGFDIDVFKFDRFTSAKEKAEIKKQLQSDKPCVCIGTHALLSIKDLSLGLIIIDEE
HKFGVKQKEQLKEISSSCHLLSMSATPIPRSLNMALSSIKSYSTLTTPPQNRLDIRTLVK
EWDEKIIKEAIARELRRGGQTFYIHNHIATMESAKKELLGIIPNLKILILHSKIDPKTTE
IEMIKFANKEYDVLLCTSIVESGIHLPNVNTIIINNANNFGMADLHQLRGRVGRSDKQGF
CYFLVENKLSLSSQSVKRLVSLESNSFLGAGSVLAYHDLEIRGGGNLVGVEQSGHIEAIG
YSLYLRMLETQINTLLNQNLAKENKEIELKLSINAFLNSDFISEDRLRLELYRRLSKCSD
VKEVYEIQSEIEDRFGRLDIYTLQFIELMAIKVMAIKQDFVYIGNYEQNITLKKQNGESI
KLKSKSKDDDDIINEVLVYLRKESSK
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaagtgaaatttatgagttttgtcttgaaaaaaatgattttgatattatagtttgc
gatgatgataaagaggcaagtgttattagcgatgttgtgagttattgtggtatagaggct
tatagattaccagattttagggcaagttttggagatgatttaagaccatttaatgcagag
ctttttgaaatatcttctgttttaaatagtttttataaatcaagctcaaaaaagctgtta
ataagcccaattagaacacttttaaacaaattaccatcaaaatctcattttcatactata
aatttgagttttgcagacaaaatagatttaaattctttcaaagaagagattttaagattt
ggttacaacatagttgatatagtagaaagtgaagcagaggttagttttaggggtgagata
atcgatattttttgtatcggaaaagaaaaaccttttagagtgcttcttaatgatgatgag
atagaaagcataagatattataatccaagcacacaaaaaagtgataagatcgaacttgaa
agtatagaaatttcgccatttttagcttatttaagtaagaatgagtatgaaaatgtaaca
aacaagatatctcaaatgcaaagcgatgcttttgtaaatgatcttaattcgcttggtttt
tgggctattgaagggtttgagaattattttgataaatttaaagtaatacttgctaatgat
ataaatttacaagatatcattacagatacggatttgtcgtttttaaaaaaacttccagtt
ataaaagaagccaaaaattttaaagatctaaacactacactaagcaaagaatttttggag
tttcataaagataaaaagattactattttatcaaaaaatgatggtatttttaagtcttat
gagcttgattgtttttcaaatgtaaatttaaaaatttcaccttatgttgtaaatttaata
agcaaagatgagattattttatcgctaaataaatttgaaaagaaaaaacgagttagaaaa
tcaagtcttgttttagatgagttaaatagcggagatttagtcgttcatgaagattatggt
ataggtaaatttgagagtcttgagttagttgaaattttgggtgctaaaagagaatttgtt
gcgataatatatcaaaataacgataagcttttgcttccagtagagcatttaaataaaata
gacagatacatcgcaggaagcggaaatatagccgttttagacaaacttggaaagggaagt
tttgctaaaataaaagaaaaagttaggcaaaaactttttgccatagcttcaaacatcatc
gcacttgctgctaaaagagagcttataaagggtgttaaaattgagtgtgatagtttagaa
tatattaaatttatgcaaagcgctggatttgaatatacaaaagatcaaataaaagcaatt
gatgatataagcaaggatttagcaagtggcaaagtaatggatagattgataagtggcgat
gtcggttttggaaaaacagaagttgctatgaatgctatatttaaaactataaaaagcgga
tatagtgtgttattttttgttccaactacacttcttagttcccaacattacacaactctt
aaagagcgttttaagggttttgatatagatgtttttaaatttgatcgttttacaagtgct
aaagaaaaagcagagattaaaaagcaacttcaatcagataaaccttgcgtttgtatcgga
actcacgctcttttaagtataaaggatttaagtttagggctaattatcatagatgaagag
cataaatttggcgtaaaacaaaaagaacaattaaaagaaatttcatcatcttgtcatctt
ttaagtatgagtgcaactcctatcccaagaagcttaaatatggcactaagctccataaaa
tcatatagcacacttacaactccaccacaaaataggctagatataagaactcttgtaaaa
gagtgggatgaaaagattataaaagaagccattgctagagagttaaggcgtggcggacag
acattttatatacacaaccacattgccactatggaaagtgcaaaaaaagaacttcttggc
attatcccaaatttaaaaatactcatacttcattcaaaaatagatccaaaaacaacagaa
atagaaatgataaaatttgcaaataaagagtatgatgtattgctttgtactagtatcgta
gaaagtggaattcatttaccaaatgtaaatactatcattataaataatgcaaataatttt
ggtatggctgatttacatcaacttagaggaagagttggaagaagcgataagcaaggattt
tgttattttttagttgaaaataaattatctttgagtagccaaagcgtaaaaagactagtt
tctcttgaaagtaactcgtttttaggggctggctctgtgctagcatatcacgatttagag
attagaggtggtggaaatttagttggtgtcgaacaaagcggacatatagaagctattggg
tattcgctttatttaaggatgcttgaaacgcagattaacacacttttaaatcaaaattta
gcaaaagaaaacaaagaaatagagctaaaacttagtataaatgcatttttaaatagtgat
tttataagtgaagataggttgagattagaactttacagaaggcttagtaagtgtagcgat
gtaaaagaagtttatgaaatacaaagcgagatagaagatagatttggcagattagatatt
tatacattgcagtttattgaacttatggctataaaagttatggctataaagcaagatttt
gtttatattggaaattatgagcaaaacattactcttaaaaagcaaaatggcgagagtata
aaactaaaatcaaaaagcaaagatgatgatgacattataaatgaagttttggtttatttg
aggaaagagagtagtaaatga
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