Campylobacter sputorum: CSF_0839
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Entry
CSF_0839 CDS
T04992
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cspf
Campylobacter sputorum
Pathway
cspf03420
Nucleotide excision repair
cspf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cspf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSF_0839
03430 Mismatch repair
CSF_0839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspf03400
]
CSF_0839
Enzymes [BR:
cspf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSF_0839
DNA repair and recombination proteins [BR:
cspf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSF_0839
MMR (mismatch excision repair)
Other MMR factors
CSF_0839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
CarD_TRCF_RID
eIF3_p135
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ASM36714
LinkDB
All DBs
Position
complement(830701..832761)
Genome browser
AA seq
686 aa
AA seq
DB search
MDKIFQNLNEEQQKAVKHIDGPMLILAGAGSGKTKTITSRLAYLISVVGIAPSNTLTLTF
TNKAANEMKNRALNMLEKSTISSPPLLCTFHKFGLLFLKFHISRLDRKNNFVIIDTNDKK
RILKSFESDIPTAILGSEISKYKNTLLSVNDVKKNISTLLNGKENDFYAKVASIYERYEN
YLKDNNLVDFDDLLMLTYKILDSDDKLANEISQRYQYIMVDEYQDTNDLQLKLLQKLCKT
HNNICVVGDDDQSIYGWRGTKIENILNFKDQFDNVKIVKLEQNYRSTASILKAANELIEH
NRNRLGKKLISTKQEGNDITIFNCDDESVESSKIATKIKELLNSGVEAKDIAILYRINAL
SRSLEEGLNRENIHYKMVGGVKFYERTEIKDIISYLRLAINQNDDFSLERIINRPKRGLG
KVTIGKIQKVAFDNKTSIYQAINNIKSDDVGKKNLNTLLELSSNLEELSHFDGIYDLINM
LETKFGIKKFYEDMPDGAERVANIDEFYALLRDQAMNDDEFELEEFLNEISLQSDQDSIN
EESIAIMSIHASKGLEFKYLFVIGLEEGFFPLIGDGSDIEEERRLAYVAITRAKEHLTLS
HAESRFYKGKRERLKKSRFLSEAGLCEGSLQIEQQKEFKKGDLIKHKIFGIGRIVEITKV
NQDFKLKINFGGITREIMSNFVEKAV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatttttcaaaacctaaatgaagagcaacaaaaagcagttaaacacatagat
ggtcctatgcttattttagctggagctggtagcggcaaaacaaaaaccataacttcaaga
ctagcttatcttatatctgtagttggcatagccccatcaaatacactaacattaacattt
acaaataaagcggcaaatgagatgaaaaatagagctttaaatatgctagaaaaaagcact
atatcatctccgccgctactttgcacatttcataaatttggattgttatttttaaaattt
cacatatcaagacttgatagaaaaaacaactttgtcataatagatacaaatgataaaaaa
agaatcttaaaaagttttgaaagcgacattcctacggctattttaggaagcgaaatttca
aaatacaaaaatactcttttaagtgttaatgatgttaaaaaaaatatatctacactttta
aacggaaaagaaaatgatttttatgctaaagttgctagtatttatgaaagatatgaaaat
tatctaaaagacaacaatttagtagattttgatgaccttttaatgcttacttataaaatt
ttagatagtgatgacaaactagcaaatgaaatctcacaaagataccaatatatcatggtt
gatgaatatcaagatacaaatgatttacaattaaaattattacaaaagctctgcaaaacc
cacaataatatatgcgtggttggcgacgatgatcagagtatttatggatggcgtggaaca
aaaatagaaaatattttaaatttcaaagaccaatttgataatgtaaaaatcgtaaaatta
gaacaaaattatcgctcaactgcatctatactaaaagctgcaaatgaactgattgagcat
aatagaaaccgccttggcaaaaaattaatcagcacaaaacaagagggcaatgatataact
atatttaattgcgatgatgaaagtgtagaatcaagcaaaattgcaactaagataaaagag
cttctaaactctggtgtagaggcaaaagatatagcgatattatataggataaacgctctt
tctcgctcattagaagaaggattaaatagagaaaatatccattataaaatggttggtgga
gttaaattttatgaaagaacagagataaaagatatcataagctatttaagacttgcaata
aatcaaaatgatgatttttctttagagcgtattataaatcgcccaaaaagaggtcttgga
aaagtaactataggcaagatacaaaaagttgcatttgataataaaacatctatatatcaa
gctataaacaatataaaaagtgatgatgttggcaaaaaaaacttaaacacgcttttagaa
ttatcttcaaatttagaagaattatcgcattttgatggaatttatgatcttattaatatg
ctagaaactaaatttggcataaaaaaattttatgaagatatgccagatggagcagaaaga
gttgcaaatatcgatgagttttatgcactacttagagatcaagcaatgaatgatgatgag
tttgaattagaagagtttttaaatgaaatttctcttcaaagcgatcaagatagcataaat
gaagaaagtattgctataatgagtattcacgctagcaaaggtttagaatttaaatatctt
tttgtaataggacttgaagagggatttttcccgttaattggcgatggaagcgatatagaa
gaagagcgaagacttgcttatgttgcgataactagagcaaaagaacatcttactttaagc
catgcagaatctagattttacaaaggaaaaagagaaagacttaaaaaaagtagattttta
agtgaagctggtctttgcgagggctctttacaaatagaacaacaaaaagaatttaaaaaa
ggtgatttgattaaacataaaatttttggcataggaagaattgtagaaataaccaaagta
aatcaagattttaagctcaaaataaactttggcggcataactcgcgagataatgtcaaat
ttcgtggaaaaagcagtatga
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