Campylobacter sputorum: CSF_1391
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Entry
CSF_1391 CDS
T04992
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cspf
Campylobacter sputorum
Pathway
cspf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cspf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSF_1391 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspf03400
]
CSF_1391 (uvrB)
DNA repair and recombination proteins [BR:
cspf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSF_1391 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSF_1391 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
SWI2_SNF2
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ASM37240
LinkDB
All DBs
Position
1378876..1380852
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AA seq
658 aa
AA seq
DB search
MKNFEIYSKFSPNKDQQNAIDGIVKSIKAGNKFQTLLGVTGSGKTFSMANIIKNLDMPAL
IMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSVNEELER
LRLSATASLLSYDDVITIASVSANYGLGNPKEYQGMVMYFELGKSLSQKKLLLKLVEMGY
KRNDTYFDRGDFRVNGDTIDIYPAYHNDEALRLEFFGDELDYMYHFDVLENKKTKEIKKF
ILYPTSQFIVGVDRLKEAIKGIESELEDRLEYFQKEGKVVEYARLKQRVEFDLEMLSSTG
STKGVENYARYLTGQKPGETPYTLFDYYEINFDDYLVIIDESHVSLPQFRGMYAGDKSRK
ETLVEYGFRLPSALDNRPLKFDEFISKKAKFLFVSATPNEYELELSGKNVFHQIMRPTGL
LDPKITLKDSDNQVEILYDMAKEVIQRGDRILVTVLTKKMAEELTKYYLELGLKVKYMHS
DIDAIERNELIRGLRSGNYDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQT
IGRAARNLNGEVVMFCKKITKSMKEAIDTTAKRRKLQDEYNKANNITPKSATRNIEESLK
IEDGAEIYRVSKNSEKMPASQRAKIVKELRKQMMDAASKLEFEKAAALRDEIAKLRKI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaattttgaaatttatagtaaattttctccaaacaaagaccagcaaaacgcaata
gacggcattgtaaaatctatcaaagcaggaaataaatttcaaactttgcttggtgttact
ggaagtggcaaaacttttagtatggcaaatatcattaaaaatttagatatgccagctctt
ataatgacgcacaataaaagcttagcagcacaactttatagtgaatttaagggatttttt
ccaaaaaatcatgtagagtattttataagctattatgattattatcaaccagaagcttat
ataccaaggagcgatcttttcatagaaaaagacagctcagtaaatgaagagctagagcgt
ctaagactaagtgcgacagcttcacttttaagctatgatgatgttataacaattgcctcg
gtttctgcaaactatggtcttggaaatccaaaagagtatcaaggtatggttatgtatttt
gaactaggaaaaagtttaagtcaaaaaaaattacttttaaaactggttgaaatgggatat
aaaagaaatgatacttactttgatagaggtgattttagagtaaatggcgatactatagat
atttacccagcttaccataacgatgaagcattgaggcttgagttttttggagatgagcta
gattatatgtatcattttgatgtgctagaaaacaaaaaaacaaaagagattaagaaattt
atactctatccaacaagtcagtttatagttggcgttgatagactaaaagaagctataaaa
ggcattgagtctgagcttgaagataggcttgagtattttcaaaaagaaggtaaggttgta
gaatatgcaaggctaaaacaaagggttgagtttgaccttgaaatgctaagttcaacagga
tcaacaaaaggtgttgaaaactatgctcgttatttaacaggacaaaaacctggtgaaaca
ccatacacactttttgattattatgagataaactttgatgattatcttgttataattgat
gaaagccatgtaagtttgccccagtttcgtggtatgtatgcaggagataaaagtagaaaa
gaaactcttgtagagtatggttttagacttccctcagcacttgataaccgccccttgaaa
tttgatgagtttatatcaaaaaaggctaaatttctatttgtttcagctaccccaaatgaa
tatgagttagaactaagtggaaaaaatgtatttcatcaaattatgagaccaactggactt
cttgatccaaaaatcacactaaaagatagcgataatcaagtagaaattctttatgatatg
gcaaaagaggtaattcaaagaggcgatagaattctagtaacagttttaaccaaaaaaatg
gcagaagagcttacaaaatactacttggaacttggacttaaagtaaaatacatgcactca
gatatagatgctattgagagaaacgagctgataagaggtttaagaagcggaaattatgat
atgctaataggtataaatttactccgagagggacttgatctgccagaagtttctttaatt
gcaataatggacgcagacaaagaaggttttttacgctctacaacaagccttatacaaacc
ataggaagagctgctagaaatttaaacggcgaagttgtgatgttttgtaaaaaaataaca
aaatctatgaaagaagccattgatacaacagcaaaaaggcgaaagctccaagatgagtat
aataaagctaacaatatcacaccaaaaagtgctacaagaaacatcgaagagagcttaaaa
atagaagatggggcagaaatttacagagttagtaaaaatagcgaaaaaatgccagcaagc
cagagagctaaaatagtaaaagagcttagaaaacagatgatggatgctgcttctaagctt
gagtttgaaaaagcagcggcactgcgtgatgagatagcaaaactaagaaaaatttaa
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