Cytobacillus spongiae: LS684_00020
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Entry
LS684_00020 CDS
T09119
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
cspg
Cytobacillus spongiae
Pathway
cspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LS684_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_00020 (recF)
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LS684_00020 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_27
DUF2813
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UII55968
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All DBs
Position
3152..4270
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AA seq
372 aa
AA seq
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MYIEQLKLRSYRNYEQLDIEFENKVNVILGENAQGKTNVMESIYVLAMAKSHRTSNDKDL
IRWDEEYAKIEGRVEKQHGSLPLQLVISKKGKKAKCNHIEQQRLSQYVGNLNVVMFAPED
LHLVKGSPQVRRRFIDMEIGQVSPVYLHDMGQYQKILQQRNHYLKLLQTKKQTDLTMLDI
LTEQFIETAVKIIAKRYEFLHLLQEWAKPIHEGISRGLENLRIEYKPSVDVLEDQDLSKM
ITIYEEKFGKIKKREIERGVTMFGPHRDDLVFYVNDRDVQTFGSQGQQRTTALSLKLAEI
ELIHSEIGEYPILLLDDVLSELDDYRQSHLLNTIQGRVQTFVTTTNVDGIDHQTLKDAST
FQVSTGTMTKIQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtatattgagcaattaaaattgagaagctaccgaaactatgaacagttagatatagag
tttgaaaataaagtcaatgtcattcttggggaaaatgcgcaaggaaaaacaaatgtaatg
gagtctatttatgttcttgcgatggctaaatcacatcgaacgtcaaatgataaagatctt
attcgctgggacgaagaatatgctaaaatagaaggtagagttgaaaaacaacacggttca
ctccctttgcaattagtgatttcaaaaaaagggaaaaaagctaaatgtaatcacatagaa
cagcaacgacttagccaatatgtcggaaatttaaatgtagtcatgttcgcgcctgaagat
ctccatctcgtaaaagggagccctcaagttaggcgccgttttattgatatggaaattggt
caggtttcccctgtatatttacacgatatggggcaatatcagaaaatattacagcagcgg
aatcattacttaaaacttttacaaacaaaaaaacaaacagatttgacgatgctagacata
ttaaccgagcagtttattgagacggctgttaaaattattgcaaaaaggtatgaatttcta
cacctactacaagaatgggcgaaaccgattcatgaagggatttcacgcgggttagaaaac
ttaagaattgagtataaaccttcagtagacgtattagaagatcaggatttgtcgaaaatg
ataacaatttacgaggagaaatttggtaaaataaaaaagcgtgaaatagagcggggggtt
acgatgtttggacctcaccgagatgacctcgtattttatgtgaatgaccgggatgtacag
acatttggatctcaaggtcagcagagaacaacagctctttcactgaaacttgctgagatc
gagttaattcattcggaaattggcgaatatccgattttgctacttgatgatgttctttct
gagcttgatgattatcgacaatcccatctcttaaatacgattcaaggtagagtacagacc
tttgtaaccacgacaaatgttgatggaatcgatcatcaaacattaaaagatgcttccaca
tttcaagtgagtaccggaacaatgacaaaaatccagtga
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