Cytobacillus spongiae: LS684_00085
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Entry
LS684_00085 CDS
T09119
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cspg
Cytobacillus spongiae
Pathway
cspg00750
Vitamin B6 metabolism
cspg01100
Metabolic pathways
cspg01240
Biosynthesis of cofactors
Module
cspg_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LS684_00085 (pdxS)
Enzymes [BR:
cspg01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LS684_00085 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
IGPS
NanE
NMO
TetR_C_27
OMPdecase
DUF188
Motif
Other DBs
NCBI-ProteinID:
UII57790
LinkDB
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Position
20851..21735
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AA seq
294 aa
AA seq
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MMKTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVAR
MADPRIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEYHLYKSE
FTVPFVCGCRDLGEAARRIGEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVSMNED
ELMTEAKLLGAPFELLLDIKKNGRLPVVNFAAGGVATPADAALMMELGADGVFVGSGIFK
SDNPAKFARAIVEATTHYKDYKLIAELSKELGTPMKGIEISSLAPEARMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atcatgaagacaggtacagatcgtgtaaaacgtggtatggcagagatgcaaaaaggtggc
gtcatcatggacgttgtcaatgcagaacaagctaaaatagctgaagaagcaggtgctgta
gcagtaatggcactagaaagagtaccttcagatattcgcgctgctggtggagtagcaaga
atggctgatcctcgtattgtagaagaagttatgaatgcggtatcaattcctgtaatggcg
aaagcacgtattggtcatattgtagaagcacgtgttttagaagctatgggagtagattat
attgatgagagtgaagtattaactcctgcagatgaagagtatcatttatataaaagcgaa
tttacggttcctttcgtatgcggttgccgtgatttaggagaagctgctcggcgtattggt
gaaggagcatctatgcttcgtacgaagggtgagccaggaacaggaaacattgtagaagcg
gttcgtcatatgcgcaaagtaaatgcacaagtgcgtaaagttgtaagtatgaatgaagat
gagctgatgactgaagctaagcttcttggagcaccatttgaacttctattagatatcaag
aaaaatggtcgtcttccagttgttaacttcgcagctggtggggtagctactccagcagat
gctgcactaatgatggaattaggagcagatggtgtgttcgtagggtcaggtattttcaaa
tcggacaacccagctaaatttgctagagcgattgtggaagctactactcattacaaagac
tacaaactaattgcagagctttccaaagagctaggtaccccaatgaaagggattgagatc
tcctcattagcaccagaagcacgtatgcaagagcgtggctggtaa
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