Cytobacillus spongiae: LS684_00135
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Entry
LS684_00135 CDS
T09119
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cspg
Cytobacillus spongiae
Pathway
cspg03030
DNA replication
cspg03430
Mismatch repair
cspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LS684_00135 (dnaX)
03430 Mismatch repair
LS684_00135 (dnaX)
03440 Homologous recombination
LS684_00135 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspg03032
]
LS684_00135 (dnaX)
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_00135 (dnaX)
Enzymes [BR:
cspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LS684_00135 (dnaX)
DNA replication proteins [BR:
cspg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LS684_00135 (dnaX)
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LS684_00135 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
TIP49
AAA_16
DnaX_C
AAA_19
AAA_5
AAA_7
AAA_assoc_2
Rad17
AAA_24
PIF1
Mg_chelatase
AAA_28
Peptidase_M75
AAA_18
TsaE
nSTAND3
RNA_helicase
MerR_2
Motif
Other DBs
NCBI-ProteinID:
UII55982
LinkDB
All DBs
Position
29301..31001
Genome browser
AA seq
566 aa
AA seq
DB search
MSYQALYRVWRPQQFIDVVGQEHVTKTLQNALLQQKISHAYLFSGPRGTGKTSAAKILAK
AVNCERAPIKEPCNECPTCKGITDGSIPDVIEIDAASNNGVEEIRDIRDKVKYAPNASKF
KVYIVDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFKRITA
KAIVNRMKLIVDETGVDCDQHALQIVARAAEGGMRDALSLLDQAISFSQDRVTVEDALTV
TGSVSQGFLNRLAKSIQQKNAAEGLEALEELLFHGKDPARFVEDFILYYRDMLLYQAAPT
LEESMERVMLDEEFQLLAKEIRAESIYELIEELNRAQQEMRWTNHPRIFLEVAIVKLCQS
EKNVNHQALPQIDTLLNRVNELEKELQQLKQNGISVQSEEQPSVSAQKKPARASRKGVQV
PMGKIKEILKNATKQDLVQLKSRWGEMLNLLVNNQMRSQAALLNEAEPVAASENAVIIKF
KYEIHCQMAMENAKFLEVLSNVLYELLGKRIQALGIPEEPWQKVRQEFLKDQQEDDSHSD
AMQVEEEPLIAEAKKLFGADLIEIKE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagctttatatcgtgtatggcgacctcagcaatttattgatgtggtgggt
caggagcatgtaacgaaaacactgcaaaacgccctgcttcagcagaaaatatcacatgct
tacttattctctgggcctagagggacagggaaaacgagtgcagcaaaaatccttgctaag
gccgttaattgtgagcgagcaccgattaaggagccgtgtaatgagtgcccaacctgcaaa
ggaattacagatggatccattcctgatgtaatagagattgatgcagcctctaataatggg
gttgaagagattcgagatattagagataaagtgaaatatgcccctaatgcatctaaattt
aaggtctatattgtagacgaagtacatatgttatcgattggagctttcaatgcgttatta
aaaacccttgaggaaccaccgaagcatgtaatctttattctcgcaactaccgagcctcat
aaaattcctttgaccatcatttccagatgtcaaaggtttgattttaagcgaattacagct
aaagcaattgtaaaccgcatgaagttaattgtagacgaaacgggagtagattgtgatcaa
catgcattgcaaattgtcgctcgagcggcagagggtgggatgcgtgacgccttaagttta
ttagaccaagcaatttcctttagtcaagatcgagtaacagtggaagatgctttaacagta
acagggtcagtttcacaaggttttttaaacaggttagctaaatcgattcaacaaaagaat
gctgcagaaggattagaagctctagaagaacttctttttcacggaaaagatcctgctaga
tttgtagaggactttattctttattatcgagatatgttattgtatcaggctgctcctact
cttgaagagtcaatggaacgagtaatgctggatgaagagtttcaattattagccaaagaa
attcgggcagaatccatctatgagttaattgaagaattaaatcgtgcgcagcaagaaatg
cgttggacgaatcatccaagaattttcttagaggttgctattgtaaagctttgtcaaagt
gagaagaacgtgaatcatcaagctttaccacagatagatactttgttaaatagagtaaat
gaattagaaaaagagctacagcagcttaagcagaatggaatttctgttcagtctgaggaa
caaccctctgtttctgctcaaaagaaaccagcacgagcgtcacgaaaaggcgttcaagtc
ccgatggggaaaataaaagaaatcttaaaaaatgcaactaagcaagacttagtgcaatta
aaaagtcgatggggcgagatgttaaaccttctcgttaataaccaaatgcgttcgcaagca
gctcttctgaatgaagctgagcctgtagcggcatctgaaaatgcagttataattaaattt
aaatatgagatccattgccaaatggccatggagaatgccaaatttctcgaagtcctttca
aatgttctttacgagcttttaggcaagagaattcaagcattagggattcctgaagaacca
tggcagaaagttcgccaagagtttttaaaggatcagcaggaagatgattcgcattctgat
gctatgcaagtagaggaagaaccgcttatcgctgaagctaagaaactatttggtgcagat
ttaattgaaattaaagaataa
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