Cytobacillus spongiae: LS684_01580
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Entry
LS684_01580 CDS
T09119
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cspg03021
]
LS684_01580 (sigB)
Transcription machinery [BR:
cspg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LS684_01580 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
PhyR_sigma-like
DUF1492
DUF134
IF2_N
KORA
HTH_23
HNF-1_N
HTH_28
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
UII56223
LinkDB
All DBs
Position
288055..288846
Genome browser
AA seq
263 aa
AA seq
DB search
MPKQSQPKLTREEINELIRDFQEEQDVEAQNRLVIQYQNLVESLARKYSKGKSYHEDIVQ
VGMLGLLGAIRRYDPSFGKTFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKLT
VEELTTTLHRSPKVIEIAEALSVSEEEVLEAMEMGKGYQALSVDHSFEADSDGGTVTLLD
MVGSTDEGYEKVNQRMMLEKVLHVLSDRERSVIHYTYLENKSQKETGEILGISQMHVSRL
QRKAIKKLKDAIDHEENNSERIS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacaatctcaacctaaattaactagagaagaaattaatgagctcataagggat
tttcaagaagagcaagatgttgaagcgcagaatagactagtcattcaatatcaaaattta
gtagaatcactagctagaaaatattcaaaaggaaaatcatatcacgaggatatcgtacaa
gttggaatgcttggattattaggagcaatccgtagatatgatccttcatttggaaaaacc
tttgaagcctttgcaattcctacaatcataggtgagattaaacgctttttacgtgacaaa
acatggagtgttcatgtcccgcgtcgtatcaaagagcttggtcccaaaataaaattgact
gttgaggaattaacaacaacacttcaccgttcaccaaaggtgattgaaattgcagaagct
ctttcagtttccgaggaagaagtccttgaagcgatggaaatggggaaagggtatcaagct
ttatctgttgaccattcatttgaagcagattcagatgggggcactgtaacgcttctcgat
atggtgggttcaacagatgaagggtatgaaaaggtaaaccagagaatgatgcttgaaaaa
gtattacacgttttatctgatcgagaaagatccgtgattcactacacttacttagagaat
aaaagtcaaaaagaaactggtgaaatactaggtatctcacagatgcatgtttctcgctta
cagcgcaaggcgattaaaaagctaaaagatgcgatcgatcatgaagaaaataattcggag
cgtatttcatga
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