Cytobacillus spongiae: LS684_03225
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Entry
LS684_03225 CDS
T09119
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cspg03000
]
LS684_03225
Transcription factors [BR:
cspg03000
]
Prokaryotic type
Helix-turn-helix
XRE family
LS684_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
SinI
HTH_26
HTH_25
Phage_CI_repr
HTH_37
HTH_38
HTH_10
DUF6626
HTH_73
HTH_7
TetR_N
HTH_Tnp_1
HTH_AraC
HTH_24
MerR_1
HTH_28
HTH_35
MerR
LacI
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
UII56510
LinkDB
All DBs
Position
complement(614310..614654)
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AA seq
114 aa
AA seq
DB search
MVGKRIKQARLKRGYSINELAERAGVSKSYLSYIERGIQENPSLQVLAKLAKTLGTSVEE
LLGSPREEWKMKVQVDNEWVELIEEAIHQGVSKEEFAYYLDFIKFKRANEEHGK
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaaaacgaataaagcaggcaagattaaaaagagggtattctattaatgagtta
gcggagagagctggtgtgtctaagtcatatttaagctacatagaacgaggtattcaagaa
aacccttcattacaggtgttagcgaaattagcgaaaactcttggaacaagtgttgaggaa
ttattaggctccccgagggaagagtggaaaatgaaagtgcaggttgacaatgaatgggtg
gaattaatagaagaagcaatccatcaaggggtgagtaaggaggaattcgcttattacttg
gacttcattaagtttaaacgagcgaacgaggagcacgggaaatga
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