Cytobacillus spongiae: LS684_05420
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Entry
LS684_05420 CDS
T09119
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cspg03019
]
LS684_05420 (yhaM)
Messenger RNA biogenesis [BR:
cspg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LS684_05420 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UII56878
LinkDB
All DBs
Position
1025804..1026748
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AA seq
314 aa
AA seq
DB search
MKKGILHYEVGEQVEVYLLIKTASKGIASNGKPFLTLIFQDQSGDIEAKLWDASDEDEKT
YAPQSIVKILGDIQSYRGRSQLRIRQIRPASPMDPVQLSDFLETAPIEKEEMSSKITQYI
FEMKNPNIQRITRHLLKKHQQEFIEYPAATKNHHEFVSGLAYHVVSMLDLAKGISSLYPS
LDKDLLYAGVILHDLGKVIELSGPISTTYTVEGNLLGHISIMVNEIGQAADELGISGEEV
LILQHLVLSHHGKAEWGSPKPPLIKEAEILHYIDNIDAKMNMLDRALERVKPGEFSERIF
ALDNRSFYKPTFHK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggaatattacattatgaagtaggcgagcaggtagaggtgtatctacttatt
aaaacggcttcgaaaggaattgctagtaatggcaaaccgtttttgacactaatctttcaa
gatcaaagtggagacattgaagctaagctttgggatgcttcagatgaagatgagaaaacg
tatgcacctcaaagtatcgtaaagattttaggagatattcaaagctatcgaggacgaagc
caattgcgcattagacaaatacgtccggcgtctccaatggaccctgtccagctatcagat
tttctagaaacagctcctatagaaaaggaagaaatgtctagtaaaataacacaatatata
tttgaaatgaaaaacccaaatatccagcgaattacaagacatcttttgaagaagcatcag
caggaattcatagagtatccagcagcaacaaaaaatcaccacgaatttgtttctgggtta
gcgtatcatgtagtgtctatgcttgatttagccaaggggatatctagtttatatccaagc
ctcgataaagatttattgtatgcaggtgtgatcctacatgacttaggtaaagtcattgag
ctatcaggcccaatttctacgacttatacagttgaaggcaatttactaggccatatctcg
attatggtcaatgaaatcggccaagcagctgatgagctagggatttctggagaagaggta
ttaatccttcaacatctcgttttaagccatcatgggaaagcggaatggggaagtccaaag
ccaccactaattaaggaagcagaaatccttcactatattgataacattgatgcgaaaatg
aatatgctagaccgagcattggaacgcgtcaagccaggagaattctcggagcgaatcttt
gcattggacaatcgctctttctataagccgacattccataaataa
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