Cytobacillus spongiae: LS684_05730
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Entry
LS684_05730 CDS
T09119
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_05730 (addB)
Enzymes [BR:
cspg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LS684_05730 (addB)
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LS684_05730 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DUF7658
KIX
FAM193_C
Motif
Other DBs
NCBI-ProteinID:
UII56938
LinkDB
All DBs
Position
1088137..1091631
Genome browser
AA seq
1164 aa
AA seq
DB search
MSVHFVLGRAGTGKTTYCLNEIRKKLLAEPDGPPIIYMVPDQMTFLSEYKLITTPQLGGM
IRSQVFSFTRLAWRILQETGGISRYHLNSVGISMLIRKIIEDKKDELKLFQRTADKNGFI
DQMEQMITEFKRYCVEPAQLIEKQVTLSHSGDMTNKVLADKLHDLEVIYRSFEESTFEKY
IDSEDYFRLFTEKALNSTYLQSAEVYIDGFYSFTPQEYLIINQLMKVCKKVTITSTLDKP
FETAPPHELHLFRMPGETYQTLYQMGQSHGLAVEKTLLVEPKRWQSPALVHLEKHFDSRP
ANPFQDHAPVNIAQAVNRRAEVEGVARKIKQLVQKEELRFRDIALLLRNGNEYHDLIESI
FQDYEIPFFIDQKRTMLNHPLVELIRSSLEIINGFWRYEPIFRAVKTELLFPVKLNVRKV
REQTDRLENYVLAYGVQGVKWTKKDRWVYRRIRGLEFEDIAQTDAEKIVEDELNNLKEMI
SAPIIRMSRRLKKARDGRGLAEALFLYLEELDIPVKLEKWKLDEEERGNLLKAREHDQAW
NSIVDLLDQFVEMLGDEEVSLKQFASILDAGLESLKFSLVPPALDQVLIADMEKSRLTDI
KAAFVMGVNEGVLPAKFSEDGILADDDRELLLSTGVKIAPSSRTRLLDEEFIAYKAITTA
SQYIYITYPLANEEGKALMPSSYIKRIQDLMPFAHKHFFLSDPAELSETDQLEYAVNEKT
ALAYLTAQLQLKKRNYPVYDFWWDVYNYYMDHEKWKAPAKKVLSSLNYENRTKPLTEKTS
QELYGDLIQASVSRMELFHSCPFSHFVQHGLKLRDRQIFRLEAPDIGDLFHAALKYIAET
IMTQNQSWGDLSKAQLEQLAKQAVEMLAPKLQNEILLSSNRHHYIKRKLENIISRASFVL
SEQAKASGFSPIGLELGFGPKAQLPPLAFSLNNGTKMELVGRIDRVDKAEHSDGVFLRII
DYKSSSKDLAVSDVYYGLALQMLTYLDIIITHSKSLIGKTADPAGVLYFHVHNPLVNAKK
VMTLDEIEDEIFKKFKMNGLMLGEDQVIRLMDNTLESGDSSIVAAGIKKDGSLSKRSKVA
SKEEFNLLRNYVRKQYLTTGNAITEGTLHISPYKMKDRTPCTFCSYKSVCQFDESLEQNE
YRVLLPQSKDDVLAKIREEVNKNE
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcattttgtattaggaagagctgggactggaaaaacaacctattgtttaaat
gaaattcgcaaaaagttgctggctgaaccggatggtcccccaatcatttatatggttcca
gaccaaatgacgtttttatcagaatataagctaatcacaaccccacagcttggtggaatg
atccggtcccaagtgtttagctttactcgtttagcttggagaattctccaagagaccggt
gggattagtcgctatcatctaaatagcgtggggataagtatgttaatacgtaagattatt
gaagataagaaggatgaattaaagctttttcaacggacagctgataaaaatggttttatt
gatcaaatggagcagatgatcaccgaatttaaacggtactgtgtagaaccagcgcagctg
attgaaaaacaagtcaccctttctcactctggtgacatgaccaataaagtgctagcagat
aaacttcacgatctagaggtaatctaccgaagctttgaagaatcaacatttgaaaagtat
attgattcagaagattatttccgattattcactgaaaaggctttaaattctacgtatttg
cagtcagcagaagtatacattgatggattttatagctttaccccccaggagtatttaatt
attaatcaattaatgaaggtttgcaaaaaagtaaccattacctctactctagacaagcca
tttgaaacagcacctccccatgagcttcatttatttaggatgccgggagaaacctaccaa
acgctctatcaaatgggacaatcccatggattagctgttgaaaaaaccttactagtagag
ccaaaacgctggcaatctcctgctttagtccatttagaaaagcattttgactcaagacca
gcaaatccttttcaagatcatgcacctgtcaatattgctcaggctgttaaccgaagagcg
gaagtcgaaggggtagcaaggaaaataaaacaacttgttcagaaggaagaacttcgcttt
cgagatatagctttattattaaggaacggcaatgaatatcatgatttaattgaatcgatt
tttcaagattacgagattccattctttattgatcagaaacgaacgatgctaaaccaccct
ctagtagaactcattcgttcaagtctagaaattatcaatggcttttggcggtatgaaccc
atttttcgtgcagtaaaaacggaactattatttcctgtgaaattaaatgttcgtaaagtc
agagagcagaccgatcgccttgaaaactacgtgctagcctatggagtccaaggcgtgaag
tggacgaaaaaagatcggtgggtatatcgaagaatccgtgggttagagtttgaagatatt
gcccaaacagatgcagaaaaaatagtagaagatgaattaaacaacttaaaagaaatgatt
tcagctccaattataagaatgtcaagaagactaaagaaagcaagggacggaagagggctg
gcagaagccttatttctatatttagaggaactagacattccagtgaaattggaaaaatgg
aagcttgatgaagaagagagagggaatctattaaaggcaagagagcatgatcaagcatgg
aattcgattgtggatttacttgaccaatttgttgaaatgctcggagatgaagaagtttca
cttaaacagtttgcttcaattcttgatgcaggattagagtcattaaagttctcccttgta
ccacctgcattggatcaggtgcttattgcagatatggaaaaatctagattaactgatata
aaagctgcatttgtaatgggagtgaacgaaggagtattacctgctaaattttcagaggac
ggaatactagcagatgatgatcgggagctactactctcaacaggagtgaaaatagctcca
agtagtagaactcgtttgttagacgaggaatttattgcctataaagcaattacaacggca
tcccaatatatttatattacgtatccgcttgcaaatgaagaagggaaagcacttatgcct
tcctcttatattaaacgtattcaagatcttatgccttttgcacataaacacttcttctta
tcagatcctgcggagttatcagaaacagatcaattagaatatgcagtaaatgagaaaacg
gcacttgcctatttaacagctcagctgcaattaaagaaaagaaactaccctgtgtatgat
ttttggtgggatgtatataactactacatggaccatgaaaaatggaaagcacctgctaaa
aaggtactttcaagcttaaattatgaaaatcgaaccaagccacttacagaaaaaacaagt
caagaattatatggtgatttaattcaagccagtgtgtcgcgaatggaactgtttcatagc
tgtccattctcccatttcgtgcagcacggattaaagctaagagaccggcaaatattcagg
cttgaagcaccggatattggtgatctgtttcacgctgcgcttaaatatattgcagagacc
attatgacgcaaaatcaatcttggggcgatttatccaaagctcagcttgagcaattggca
aaacaagctgtagaaatgctagcaccgaaactgcaaaatgagattctattaagctcaaat
cgtcaccactatattaaaagaaagcttgagaatattattagccgtgcttcctttgtttta
agtgaacaggcaaaagcaagcggtttttctccgattgggttagagctaggttttggaccg
aaggcacagttacctccgctagctttttcattgaataatgggacgaaaatggagctagtt
ggccgaattgatcgtgtagacaaggctgaacatagtgatggtgtattcctaaggattatt
gattataaatctagctcaaaggatttggctgtaagtgatgtttattatggacttgcctta
caaatgcttacttatcttgacataatcataacccattcaaaaagcttaatagggaaaaca
gcggatccagcaggtgtattatatttccatgtgcataatccattagttaatgccaagaaa
gtgatgacacttgatgaaatagaagatgaaatttttaaaaagtttaagatgaacggtcta
atgcttggagaagaccaggtaatacgcttaatggacaatacgctagaatcaggcgattct
tctattgttgcagctggtattaaaaaggatggtagtttatcaaaacgatcaaaggtagct
agtaaagaggaatttaatctattaagaaattatgttcggaagcaatatttaactactgga
aatgccattacagaagggacattgcatatttccccttataaaatgaaggatcgaactcct
tgtacgttctgttcatataaatctgtatgtcaatttgatgaatcgttggaacagaatgaa
taccgagttcttctcccgcaatccaaagatgacgtgctagctaaaattagagaggaggta
aacaagaatgaataa
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