Cytobacillus spongiae: LS684_06315
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Entry
LS684_06315 CDS
T09119
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cspg
Cytobacillus spongiae
Pathway
cspg03420
Nucleotide excision repair
cspg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LS684_06315
03430 Mismatch repair
LS684_06315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_06315
Enzymes [BR:
cspg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LS684_06315
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LS684_06315
MMR (mismatch excision repair)
Other MMR factors
LS684_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
CoiA
Viral_helicase1
Proteasome
DEAD
Motif
Other DBs
NCBI-ProteinID:
UII57050
LinkDB
All DBs
Position
complement(1214542..1216824)
Genome browser
AA seq
760 aa
AA seq
DB search
MNTALHNEKLVNLVKYQREIYQFLYEEGKKGRLTCPACLEPVRLYLGIQDEPHFFHISNR
PSTCQDKLSIQKPIEIIESSKELNGFQIPKSRTITVVQEQTTSFKKAKSVKAPPPFQPTS
VEQANLQASYLQKLANDGTFLDEHQSNAVTAVNGPLLVLAGAGSGKTRVLTARTAYMLNE
HRIKGNEMMLVTFTAKAANEMKMRLLQYPDMNQQMVKQLVTGTFHSIFYRILSFHQPEQY
SSEKLLKKDWQREQILKEAGRELKLDEKEFAYDLALQQIGLWKNSLIAPNHVHAKTPWEE
KVAFLYQYYENFKQKQRLFDFDDMLIGCYQLFTEQPQLLSIYHNRLHYFLIDEFQDINKV
QYELMKLLSSKSNNICAVGDDDQSIYAFRGSDPHYLLDFEQDFPTAKVVILDQNYRSNHP
IVATANAIIKKNKQRRAKSMIAQYDRDHAPIFFYPFDEEEEATMILTDILEKMEAGASPE
DFAILYRTHTGSRAIFERFVHSSLPFTIDQDAESFYDRFIVKSMLGFLKLSLNEDDQESI
KQILPALFVKQSVLQDLKAESILQDCTLLECLPQIKTGFAFQESKLKRVLQITRTLASLS
PVVAIEKVEKELGFQDFIKKRGNEGNQMDKGSDDIRDLKVAAKRFQTLYEFLEHVDHMRA
MNREIKALSKDRQHAVTLSTIHRAKGLEYKTVYILGAVDGSIPHDYALDAYRNGDEGPLE
EERRLLYVAMTRAQEHLYLSVPEKRRGKTANSSRFLQPIR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgctctacataacgaaaaactagtgaatttagttaaatatcaaagagaaata
tatcaatttctttatgaagaaggaaaaaaaggaaggctcacttgtcctgcttgcttagaa
ccggttcgactgtatttaggtattcaagacgaacctcatttttttcatatatccaatcgt
ccttcaacatgtcaagacaaactttcaattcaaaagcctattgaaataattgaaagctca
aaagagttaaacggctttcaaattccaaaatctcgtacaatcactgttgttcaagagcaa
acaacttcttttaaaaaagcaaaatcggttaaggctcctcccccttttcagccaacgtca
gtagagcaagcaaacttacaggcgtcatatctacaaaaattagcaaacgatggaacattt
ctagacgaacaccaatctaatgctgttactgccgtaaatggtcctcttctcgtgctcgca
ggcgcaggaagcggaaagacacgtgttttaacagcacgaacagcatatatgttaaatgaa
cacagaataaagggtaatgaaatgatgcttgtaacatttacagcgaaagcagcaaatgaa
atgaaaatgcgcttacttcaatacccagacatgaaccagcaaatggtgaaacagctcgta
actggaacgtttcatagcattttctacagaatattgtccttccatcaaccagaacaatat
tcatctgaaaaactactaaaaaaagattggcaacgggaacaaatattgaaagaagctgga
agagaattaaagctggatgaaaaagaatttgcgtatgatctagcgttacagcaaattggc
ctgtggaaaaattccctaatcgcaccgaatcatgtccatgcaaaaaccccatgggaagaa
aaggtagcatttctctatcaatattacgagaatttcaagcaaaagcagagactctttgat
tttgatgatatgttaattggctgttatcagctttttacagaacagccacagcttttatcc
atctaccataatcgacttcactattttcttattgatgaatttcaagatattaataaagtt
caatatgaattaatgaaactcctttcttcaaagtcaaataatatttgcgctgtgggagat
gatgatcagtccatttatgcctttcgtggaagtgaccctcactatttacttgactttgaa
caggactttccaactgccaaggttgtcatccttgatcaaaactaccgttcaaaccatcct
attgtcgcaactgccaatgccatcattaagaagaacaaacagagacgagcgaaaagcatg
attgctcaatacgatcgagaccatgcaccaatcttcttttatccctttgatgaggaagaa
gaagcgacaatgatattaacagatatattagaaaaaatggaagctggggcaagccctgag
gattttgcaatcttatatcgtacacacacagggagccgagctatattcgaacgatttgtc
cattcgagtctcccatttacgattgaccaagatgctgaatctttttatgatcgatttatt
gtaaaaagtatgctcgggtttcttaagctttccttgaatgaagatgatcaagaatcaata
aaacaaatcttgcccgccttatttgtgaagcagtctgttctgcaggatttaaaagcagaa
agcatcttacaggattgtactttattagagtgtcttccacaaattaaaacaggcttcgcc
tttcaggaaagcaaactaaaacgagttctgcaaattacccgaacattggcttcattatca
ccagttgtagctattgaaaaggtggaaaaggaattaggatttcaagattttattaaaaag
cgtggaaatgaaggcaaccaaatggacaaaggttcagacgatatacgagatctaaaagta
gcagccaaacgatttcaaacgttatatgagtttctggagcatgtagaccatatgcgtgcc
atgaaccgcgaaataaaggcacttagcaaagatcgacaacacgctgtcaccctaagtacc
attcatcgagcaaaaggactcgaatacaaaaccgtctatatactcggagcagtcgacggc
agtattccccatgactatgcactagatgcgtatcgtaacggtgatgaaggacccctagaa
gaagaaagaagactactttatgttgccatgactcgagcacaagagcacctctatttatcc
gttccagaaaaacgccgaggaaagaccgcaaactcatctcgttttttacagccaattcgg
taa
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