Cytobacillus spongiae: LS684_08470
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Entry
LS684_08470 CDS
T09119
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cspg03016
]
LS684_08470 (truB)
Enzymes [BR:
cspg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LS684_08470 (truB)
Transfer RNA biogenesis [BR:
cspg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LS684_08470 (truB)
Prokaryotic type
LS684_08470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UII57455
LinkDB
All DBs
Position
1668137..1669051
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AA seq
304 aa
AA seq
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MEGILPLFKPKGMTSHDCVFKLRKILRTKKVGHTGTLDPDVTGVLPICIGRATKVAEYIT
DAGKAYEGEVTIGFSTTTEDASGDVVAERKVSGSLKREDILAVIQSLTGEIQQTPPMYSA
VKVNGKRLYEYARQGIEVERPTRKVTIYSIELLDDRDVFTGETITFKFRVSCSKGTYIRT
LAVMMGEQLGYPAHMSELTRIQSSSFAVKDCLTFTEIEEHMEKGTIDDVLRPLEMALSHL
PKYQINDTVAEKVKNGAVLSIPAELSMIKGPIAIETSDGLVLAIYEHHPTKPGLMKPSKV
LRND
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaattctacctttatttaagccaaagggaatgacatcccatgattgtgttttt
aagttaaggaagatcttaagaacaaagaaggtaggacatacgggtacgttagatccggat
gttacaggtgtactccccatctgcattggacgagcaacaaaggtagcagagtacattacc
gatgcgggtaaagcatatgaaggagaagtgacgatcggtttttccactactacagaagat
gcttcaggtgatgtagtagcagaaagaaaggtatctggaagcttgaaaagagaagacatt
ctcgcagtcattcaatcacttactggtgaaattcaacaaactccaccgatgtactctgca
gtgaaagtaaatgggaagcgtctttatgagtatgcacgccaagggattgaagtcgagagg
ccaacgagaaaagtaacaatctattccatcgaacttttagatgacagggacgtatttaca
ggtgagacgattacgtttaagttccgcgtcagctgtagtaaaggcacatatattcgaaca
ctagctgtcatgatgggagagcaattaggatacccagcacatatgtcagaattaacaaga
attcaatcttcctcttttgcagtaaaggattgcttaacatttacggagattgaagaacat
atggagaagggaacgattgacgatgttttgcgacctttggaaatggcgctttctcatttg
ccgaaatatcaaataaatgatacagtagcagagaaagtaaaaaacggggcggttttgtcg
attcctgccgaattatctatgattaaaggacctatagctattgaaacatctgacggatta
gtgttggcaatttatgagcaccatccgacaaagcctggactaatgaaaccgtcaaaagta
ttaagaaatgactga
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