Cytobacillus spongiae: LS684_09665 Help Entry LS684_09665       CDS       T09119                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism cspg  Cytobacillus spongiae Pathway cspg03018   RNA degradation Brite KEGG Orthology (KO) [BR:cspg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     LS684_09665  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cspg03019]     LS684_09665 Messenger RNA biogenesis [BR:cspg03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      LS684_09665 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  UII57890 LinkDB All DBs Position 1909903..1911510 Genome browser AA seq 535 aa AA seqDB search MYGIECDNEMVVIDCGNKFPDETLLGIDLIIPDLTYLEENKERVKGLIVTHGHEDHIGGI PFFLKKMNVPVYATRFTLGLIELKLQEHRLLGETELVEIDSQSTLTFGKMNTSFFKVNHS IPDCLGVVFDTPEGTIVHTGDFKFDLTPANSEAADIYKMAEIGRKGVLLLLSESTNAERP GATPSEQIVAEHMEDAFMKARRKVIVSTFASNVNRVQQVVDAAKKTNRKLALLGRSMVNV IGVAMERGYLQVPDGMLIDPNEVHDYPPERVAILCTGSQGEPLAALARLSTSSFRGIEIL PEDLVILAAGPIPGNERSVSKIIDQLFMLGAKVIYGSGVSTGMHVSGHGYQEDLKLMLTL MKPTYFIPIHGEYRMLHHHRMLAEAVGVEKGHTFLLKNGEVVDLEDKIARQTRSIPSGNT YIDGVGIGDVGEIILRDRKQLSEDGMLVIVLTMSRTERKLISGPDTISRGFVYVRDAEEL IQEVNRFAKKAVNDSEERSQNNWKALRQEVKKSIGQYVFSQTRRKPMILPIIIQV NT seq 1608 nt NT seq  +upstreamnt  +downstreamnt atgtatggaattgaatgtgacaatgagatggttgtcatcgactgcggcaataaatttcca gatgaaacgttgttaggaattgacttaattattcctgatctgacgtatttagaggagaac aaagagagagtcaagggactgatcgtcacccacggacatgaggaccatatcggtggcatt ccgtttttcttgaaaaaaatgaatgtgcccgtctatgccacccgttttacgcttgggttg attgagctaaagcttcaggaacatcggctgttgggggagacggagcttgtcgaaattgat tcccaatccaccttgacttttggaaaaatgaacacctcattctttaaagtgaatcatagt atcccagactgtttgggagttgtttttgatacacctgagggcacaatcgtccatacaggt gacttcaagtttgacttaacgcctgctaatagcgaggcagccgacatttataagatggcg gagattggccgaaagggtgtgcttcttcttttatcagaaagtacgaatgcggaacgtcct ggtgctactccttccgagcaaattgtagctgagcatatggaagacgcctttatgaaagca aggcgaaaagtcattgtctctacatttgcgtcgaatgtgaaccgggtccagcaggtcgtc gatgctgctaaaaagacgaaccggaagctagccctcctcggtcgaagcatggtaaatgta attggagtcgcaatggaacgaggctatcttcaagtaccagacgggatgctcattgatccg aatgaggtgcatgactatccacctgagcgtgtcgcaatcctttgtaccggcagtcaagga gagccgctcgccgcactcgcacggctatccacttccagttttcgtggaatcgaaattttg ccagaggatctcgttattttagcagctggtccgattcctggaaatgaacgaagcgtctcc aagatcattgaccagttatttatgctcggagcaaaagtcatttatggatcaggcgtttca acggggatgcacgtatccgggcacggctatcaagaggacttaaagcttatgcttacctta atgaagcctacctatttcatcccgattcacggtgaataccgtatgctccatcatcatcgc atgctagcagaagccgttggtgtcgagaaaggtcacacgtttcttttaaaaaatggagaa gtcgttgacttggaagataaaatcgctcgtcaaacgagaagcattccatcaggaaatacc tatattgatggagtcggaataggggacgttggcgaaatcatcctccgcgatcgcaagcag ctatccgaagacggaatgctcgtaatcgtcctaacgatgagcaggactgaaagaaagcta atctcaggtcctgacaccatttcaaggggctttgtctatgtaagagatgcggaagaacta attcaagaggtcaaccgtttcgccaaaaaggccgtaaacgactcagaagaaagaagccaa aacaactggaaagccttacgacaagaagtgaagaagtcaatcggccaatacgtattcagt caaacaagacggaagccgatgattttgccaattatcatacaggtataa

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