Cytobacillus spongiae: LS684_09775
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Entry
LS684_09775 CDS
T09119
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_09775
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LS684_09775
Archaeal homologous recombinant proteins
LS684_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Epimerase_2
Metallophos_3
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
UII57679
LinkDB
All DBs
Position
1928698..1929843
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AA seq
381 aa
AA seq
DB search
MKFIHTADWHLGKLVHGVYMTEDQREVLQQFVQLVEDEKPDAVVIAGDLYDRSVPPTDAV
ELLDEILYMINVELKTPVVAISGNHDSAERLSFGSSWYRNSQFYLAGKLANDFRPVHING
VNFYLTPYAEPGYVRHLLDDDSIHSHQDAMKALIGKMEETLNPNEPNVFVGHAFVLGGET
SDSERTLSVGGSGCVGAELFAPFSYTALGHLHSPTAIKHDTVKYSGSLLKYSFSEAKQKK
SVFIVEMKENGTFDIRYHSLKPKQDMRELEGHLEELLDPSFYGKQNLQDYVKINLLDEGA
LIDPINKLRQVYPNVLHLERKVIQLDQKHKSFFTSVKEEKKSEIDLFQQFYHEMTTAEFT
EDKRQAMIDVIEKVVKEANSK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattcatacggcggactggcatttggggaagcttgtgcacggtgtgtatatg
accgaggatcagcgagaggtattgcagcagtttgttcaactagtagaagatgaaaagcct
gatgcggttgtgattgccggggacttatacgatcgctcagtcccaccgaccgatgcggtt
gagctgttagatgaaattctgtatatgatcaatgtcgaactgaagacaccggtcgttgct
atttctggaaatcatgatagtgccgagcggctatcgttcgggagctcgtggtaccgaaac
agccagttttatttagctggaaagcttgccaatgattttcgcccggttcatataaatggt
gtgaacttctatttaactccgtacgccgagcctggctacgtgcgccatttgcttgatgat
gattccattcattcacatcaagatgcgatgaaggcgcttattggaaaaatggaagaaaca
ctgaatccgaatgaacccaatgtatttgttggacatgccttcgtattagggggagaaaca
agcgattcggagcggacactatctgtagggggttcaggctgtgtaggcgctgagctgttt
gcgccgttttcgtatactgcacttggacatcttcatagcccaactgcaattaagcacgac
acggtaaagtactctggttctctattaaaatattctttttccgaagcgaagcagaagaaa
tctgttttcatcgtagaaatgaaggaaaatggcacatttgatatacgctaccattcctta
aagccaaagcaagatatgagagagctagaaggccatttagaggagctgctagatccaagc
ttctacggcaagcaaaatctccaagattacgtaaaaatcaacctgttagatgaaggggca
ttaattgacccaattaataagctgcgtcaagtctatccaaatgtccttcatctcgagcga
aaagtcatccagctcgatcagaagcataaatctttttttacctcagtgaaggaagagaag
aaatcagaaatcgatttgttccagcaattttaccatgaaatgacgacggccgaatttaca
gaagacaagcgccaagccatgatcgatgtgattgaaaaggtagtaaaggaggcaaattcg
aaatga
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