Cytobacillus spongiae: LS684_14700
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Entry
LS684_14700 CDS
T09119
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cspg03019
]
LS684_14700
03009 Ribosome biogenesis [BR:
cspg03009
]
LS684_14700
Enzymes [BR:
cspg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LS684_14700
Messenger RNA biogenesis [BR:
cspg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LS684_14700
Ribosome biogenesis [BR:
cspg03009
]
Prokaryotic type
rRNA helicases
LS684_14700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
Mt_ATP-synt_B
Motif
Other DBs
NCBI-ProteinID:
UII54897
LinkDB
All DBs
Position
complement(2892547..2893857)
Genome browser
AA seq
436 aa
AA seq
DB search
MNNKKFERYEFKPFIMKAIEELGFYEPTEIQERLIPPVLKGESAIGQSQTGTGKTHSYIL
PILQKIDTSREEVQAVIAAPTRELANQIYQEILKVTQYLPEEEQIVARCYIGGTDKQRTI
EKLKKQPQVVVGTAGRINDLVKEQALFVHKANMLVIDEADLMLDMGFIEEIDQFASKMPE
NLQMLVFSATIPEKLKPFLKKYMENPKYVHVEPKQLTAAKIEHYLMPSRHRNKTELVYKA
LSIFNPYLAIVFTNTKKMADQVADALMEKGLKVGRIHGDLGPRERRKMMKQIRDLEFQYI
VATDLAARGIDIQGISHVINYEFPADLDFYVHRVGRTARAGYSGIALNIYDPSDEDALNR
LEKMGIEFKHVDLKNQEFVEIGDRNKRKKRQKQTDEVDEKAKSLVRKPNKVKPGYKKKMK
YEMEQIKKRQRRLKKK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaagaaatttgaacgttatgaatttaaaccgtttattatgaaagcaattgaa
gagctaggattttatgagccaactgaaattcaggaaagactcattccacctgtactcaaa
ggcgaaagcgccatcggtcagtcacagacaggaacaggtaaaacacattcatacatttta
ccgattctccaaaagatcgatacatctcgtgaagaagtacaagctgttattgctgcgcct
actcgtgaactagccaaccaaatttatcaagaaatcttaaaggtgactcaatatttacca
gaagaagaacagattgtcgcccgttgctatattggtggaacagataaacaacggacaatt
gaaaaattaaagaagcaaccacaggtggttgtcggtacagctggaagaatcaatgactta
gtaaaggaacaggctttatttgttcataaggcgaatatgcttgtcatcgatgaagcagac
ttgatgctggatatgggttttattgaagaaattgatcaatttgcaagtaagatgcctgag
aatctgcaaatgcttgtattctctgccacaatccctgagaagcttaaacccttccttaaa
aagtatatggaaaatcctaaatacgtacatgtagaacctaagcaattaacggcagcaaaa
attgagcattatttaatgccatctcgtcatcgaaataaaacagagcttgtatataaagca
ttatctatctttaatccgtatttagctattgtattcacaaatacgaagaagatggctgat
caagtggcagatgccctgatggaaaaaggattgaaggttggacgtattcacggagatctt
ggaccaagagaacgtagaaaaatgatgaaacaaattagggatttagaatttcaatacatt
gtcgcaacagaccttgctgcaagaggaattgatattcaaggaattagtcatgtaattaac
tatgagttcccagcagatcttgacttttatgttcaccgtgttggtagaacggcaagagcg
ggctattcgggaatagctttaaatatctatgatccttcagatgaagatgcattaaaccga
ctagagaaaatggggatcgaatttaagcatgttgatttgaaaaatcaagaatttgtggaa
atcggagaccgaaataagcgaaagaaacgccaaaagcaaacagatgaagtagatgaaaaa
gcgaagtcactcgttcgtaaaccaaataaggtaaaacctggatataaaaagaaaatgaaa
tacgaaatggaacaaattaagaagcgccaaagaagattgaagaaaaaataa
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