Cytobacillus spongiae: LS684_14740
Help
Entry
LS684_14740 CDS
T09119
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cspg
Cytobacillus spongiae
Pathway
cspg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LS684_14740 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cspg03021
]
LS684_14740 (rpoD)
Transcription machinery [BR:
cspg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LS684_14740 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UII54905
LinkDB
All DBs
Position
complement(2901701..2902825)
Genome browser
AA seq
374 aa
AA seq
DB search
MAEKSARSKEVDTELTVELVKDQLTELGKKTGVLAYDDIAEKLSSFELDSDQMDEFYEFL
GDQGVELVGDSDDADPNIKQLQKNEDEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLSA
EEEINLAKRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEK
FDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREP
TPEEIGEDMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKL
RHPSRSKRLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagtcggcccgttcaaaagaggttgatacagaattgaccgttgaactagta
aaagaccagttaacggaactgggtaaaaaaaccggagtccttgcctatgatgatatcgcg
gagaagctttcaagctttgagttagattcagatcagatggatgagttttacgaattctta
ggtgatcaaggggttgagttagttggagattctgacgatgcagacccaaatattaaacaa
ttacaaaagaatgaagatgaatttgatctaaacgatttaagtgtacctccaggtgttaaa
attaacgatcctgttcgtatgtatcttaaagaaattggtcgagtagaccttctatcagct
gaagaagaaattaatttagctaaaaggattgaagaaggcgatgaagaagcaaagcgacgc
ttagcagaagctaacctacgactagtggttagtatcgcaaaacgctatgttggtcgtgga
atgctatttttagacttgattcaagaaggaaacatgggattaattaaagcagttgagaaa
tttgattaccgtaaagggtacaaatttagtacgtatgcaacatggtggatacgccaagcc
attacgagagcaattgctgaccaagcaagaaccattcgtataccggttcatatggtagaa
accataaataaattaatccgtgttcaacgtcagttacttcaggacttaggacgtgaacca
actcctgaagaaattggagaagatatggatctaactccagataaggttcgagaaatctta
aagattgcccaagagcctgtaagtttggaaacgccaattggagaagaagatgattcacat
cttggagactttatcgaggaccaggacgcgacatctccttcagagcatgcagcatatgaa
ttacttaaagaacaacttgaagatgttttagatacgttaacagatcgtgaagagaatgtt
ttaagacttcgtttcggattagatgacggccgcacgcgtaccctcgaagaagtagggaaa
gtcttcggtgtaacacgggaacgtatccgacaaattgaagcgaaagcattgcgtaagcta
agacatccaagtcgaagcaagcgccttaaagacttcctagaataa
DBGET
integrated database retrieval system
