Cytobacillus spongiae: LS684_15995
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Entry
LS684_15995 CDS
T09119
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cspg
Cytobacillus spongiae
Pathway
cspg03030
DNA replication
cspg03410
Base excision repair
cspg03420
Nucleotide excision repair
cspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LS684_15995 (polA)
03410 Base excision repair
LS684_15995 (polA)
03420 Nucleotide excision repair
LS684_15995 (polA)
03440 Homologous recombination
LS684_15995 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspg03032
]
LS684_15995 (polA)
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_15995 (polA)
Enzymes [BR:
cspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LS684_15995 (polA)
DNA replication proteins [BR:
cspg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LS684_15995 (polA)
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LS684_15995 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LS684_15995 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
XPG_I
HHH
Motif
Other DBs
NCBI-ProteinID:
UII55145
LinkDB
All DBs
Position
complement(3162541..3165168)
Genome browser
AA seq
875 aa
AA seq
DB search
MKKLVLIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTMILNKILEDEKPSHILVAFDAG
KTTFRHKTFSEYKGGRQKTPPELSEQFPFIRELLDAFQVSRYELVNYEADDIIGTLSLQA
EKDGYEVKVISGDKDLTQLSSEKTTVNITKKGITDIEEYTPAHIQEKYGLTPEQIIDMKG
LMGDSSDNIPGVPGVGEKTAIKLLKEFQTLENLLHSIDQVSGKKLKEKLEEFRDQAVMSK
QLATITREAPVEVQISETAYEGINLDKLIPLYKELGFHSLLEKLDGVEQDVDQPLEEIAF
EMMSDVKEDMLTDESSLYVEVLEDNYHYAKIIGFSIVNKNGSYYIPTETAISSAAFKIWA
EDEEKKKIVYDAKRSEVSLRHHNIHLKGVEFDMLLASYILNPAETIEDVSSIAKRFGFQA
IQSDEAFYGKGAKRHVPEEEKLAEHLVRKGMVLSDLKNKLEKDLKENQQYELFHELEMPL
SLILADMESTGVKMDIARLKKMGEDLQGQLKDMEQRIYELAGESFNINSPKQLGVILFEK
LELPVIKKTKTGYSTSADVLEKLESEHAIIKEILHYRQLGKLQSTYIEGLLKVVNPENDK
VHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRRIRQAFIPSEKDWVIFAADYSQIELRV
LAHIAKDEKLISAFREDLDIHTKTAMEVFHVTADEVTSNMRRHAKAVNFGIVYGISDYGL
SQSLGITRKEAGKFIDRYLESYPGVKEYMEDIVQDAKQKGYVATLLQRRRYIPEITSRNF
NVRSFAERTAMNTPIQGSAADIIKKAMIDMADRLVAEKLQTRLLLQVHDELIFEAPKEEI
DILKKIVPDVMENAVELVVPLKVDFSYGPTWFDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagcttgtattaatagatggaaacagtattgcttaccgggcgttttttgcattg
ccattacttaataatgataaaggaatacatacaaatgcagtttacgggtttacgatgatc
ctaaataaaatattggaggatgaaaagccttcacatattcttgttgcgtttgatgctggg
aaaacgacttttcgtcataaaaccttcagtgaatataaaggaggaaggcaaaaaacgcca
cctgagctttcagagcaattcccttttattagagagttgctagatgcctttcaagtttca
aggtacgagcttgtaaactacgaagccgatgatatcattggtaccttatctcttcaagct
gaaaaagatggctatgaagtaaaagtcatttcaggcgataaggatttaactcaactaagc
tcagaaaaaacaactgtaaatattacaaaaaaaggaattaccgatattgaagagtatact
cctgcacatattcaagaaaagtacggccttactcctgaacaaatcatagatatgaaaggg
ttaatgggagacagctctgataatattccaggcgttccgggtgtaggagaaaagacagca
ataaagctgcttaaagagtttcagacattagaaaacctcttacactcgattgatcaagta
agtggtaaaaagctaaaagaaaagctagaagaatttagagaccaagccgtgatgagcaag
caattagctaccattacaagagaagcacctgtagaagtccaaattagtgaaactgcatat
gaggggattaacttggacaagctgattcctctttataaagagttgggctttcattcactt
ttagaaaagctagacggcgtagaacaagatgtcgatcagccgctagaagaaattgcattt
gaaatgatgagtgacgtgaaagaggatatgttaacagatgagagctctctctatgtagag
gttttagaagataactatcactatgctaaaatcattggattttcgattgtgaataaaaac
gggagctattatattccgactgaaactgcaatttcctcggccgcatttaaaatatgggca
gaagacgaggagaagaaaaaaattgtctatgatgcgaagcgctctgaagtatccttaagg
catcataacatccatttaaagggtgtcgaatttgatatgttgctcgcatcctatatatta
aacccagctgaaacaattgaagacgtttcatctattgcaaagcgctttggcttccaagct
attcaatcagatgaagctttttatggaaaaggggctaagcgacacgtaccagaagaagag
aagcttgctgagcatctagtaagaaaaggtatggttttatctgatctaaaaaataagctt
gaaaaagatctaaaagaaaatcagcagtatgagctctttcatgagttagaaatgccactg
tcacttattcttgctgatatggaatcgaccggtgtcaaaatggatattgctcgcttgaaa
aagatgggtgaggacttacaaggacaattgaaagatatggagcagcgtatctatgaatta
gctggagagtcctttaatatcaactcacctaaacagcttggagtaatattatttgaaaag
ttagagctaccagtcattaagaaaacgaaaacaggatattctacttccgctgacgtacta
gaaaaattagaatctgaacatgcaattattaaagaaattcttcattatcgccagctagga
aagctccagtcgacctatattgaagggttattaaaagtggtgaaccctgagaatgataaa
gtgcatacacggtttaatcaagctctaactcaaacaggcagattaagttcaaccgacccg
aaccttcaaaatatcccaattcgtttagaagagggtagaagaattagacaagcctttatt
ccctcggagaaggactgggtaatctttgcagcggactattctcaaattgaattaagggtt
ctagctcatattgcaaaggatgagaagttaatttctgcatttagagaagatcttgatatc
catacgaaaaccgcaatggaagtctttcatgtaacagcagacgaagtaacctctaatatg
cgacgccatgcgaaggcagttaactttgggattgtttacggaattagcgactatggcctc
tcgcaaagtcttggtataacaaggaaagaagcaggcaaattcattgatcgctatttggaa
agttaccctggggtaaaagaatatatggaagatatcgttcaagacgcgaagcaaaaaggg
tatgtagcaaccttgttacaaagacgtcgttacatccctgagattacaagtcgtaacttt
aatgtacgaagttttgctgaacgaacagctatgaatacaccgatccaaggtagcgcagca
gatattattaaaaaggctatgatcgatatggcagaccgtttagtagcagagaaattacag
acgcgtttattacttcaagttcatgatgaacttatatttgaagcaccaaaagaagaaatt
gacatactaaagaagattgtacctgatgtaatggagaacgcagtagaattagtagttcca
ttaaaggtagacttctcttacggtccgacttggttcgatgcaaaataa
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