KEGG   Cytobacillus spongiae: LS684_18425
Entry
LS684_18425       CDS       T09119                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
cspg  Cytobacillus spongiae
Pathway
cspg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cspg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LS684_18425 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cspg03400]
    LS684_18425 (uvrB)
DNA repair and recombination proteins [BR:cspg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LS684_18425 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LS684_18425 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD P-loop_SecA AAA_30 AAA AAA_22 HEM4 AAA_19 UvrD-helicase AAA_7 TrwB_AAD_bind UB2H HH_RND_rel AAA_16
Other DBs
NCBI-ProteinID: UII55580
LinkDB
Position
complement(3635873..3637852)
AA seq 659 aa
MKDQFELVSKYSPQGDQPKAIEQIVEGIQSGKKHQTLLGATGTGKTFTISNVIKEVNRPT
LIIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYRDLVLSLRTGMEIERNQLLRKLVDIQ
YERNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEIMGDREH
VAIFPRSHFVTREEKMRVAIENIEKELEVQLSVMRENGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPEDMMMVIDESHVTLPQVRAMFNGDQARKQV
LVDHGFRLPSAMDNRPLTFLEFEKHVNQIVYVSATPGPYELEHTPEMVQQIIRPTGLLDP
TIDVRPIQGQIDDLISEIQDRIQRNERVLVTTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERIEIIRELRLGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADRMTNSMELAISETKRRRLIQMEYNEKHGITPQTIQKDIRDVIRATH
AAEEQEEYKPAKNLGKLTKKEKEQLLTDMEQEMKEAAKALNFERAAELRDLILELKAEG
NT seq 1980 nt   +upstreamnt  +downstreamnt
gtgaaggaccaatttgaattagtctcgaaatactccccacaaggtgaccaaccgaaggca
attgaacaaattgtggaggggattcagtctggaaaaaaacatcaaacacttcttggtgca
acaggaactgggaaaacatttacgatctccaatgtcatcaaagaagttaacaggccaacc
ttaattatcgcgcacaataaaacattagctggacagctgtatagtgaattcaaggaattt
ttcccaaacaatgcagttgaatattttgtcagctactacgattactaccaacctgaagcc
tatgtgcctcagacagatacctttattgaaaaggacgcaagtataaacgatgagatcgat
aagctccgtcattctgctacctcttctttatttgaacggagagacgtcatcataattgcc
agtgtttcttgtatttacgggttaggttctcctgaagaataccgtgacctcgtgctttct
ttaagaaccgggatggaaattgaacgaaatcagctattacgtaaattagttgatatccag
tacgaacgaaacgatattgactttcaacgtggtacgtttcgcgtgcgaggcgatgtggtt
gaaatctttcctgcctcacgagatgagcattgtataagggttgaatttttcggtgatgaa
atcgatcgcattagggaagtggacgcattaacaggcgagattatgggagaccgtgagcat
gtagctattttcccaagatcccacttcgttacccgcgaagaaaagatgagagtggcgatt
gagaacatcgaaaaggagcttgaagtacagctctcggtgatgagagagaacggaaagctg
ctagaagctcagcgactagaacaaagaactcgttatgatcttgagatgatgagagagatg
ggcttctgttcggggattgaaaactactcccggcatttaaccctacgtccacccggctcg
acaccatatacactgttagattattttcctgaggatatgatgatggtcattgatgagtcc
catgtgacactcccgcaggttcgggccatgtttaacggagaccaagcccgtaagcaggtt
cttgttgatcacggtttccgtctgccatctgcaatggacaatcgaccgctaacctttctt
gaatttgaaaagcatgtgaatcaaattgtctatgtatcggcaacacctgggccatatgag
ctagaacacacacctgagatggttcaacagattatccgtccaactggcttgcttgatcct
acgatagatgttcgcccaatccaaggacaaatcgatgacctaattagtgaaattcaggat
cgaattcaacgaaatgaacgggtactcgttactacgcttacgaaaaagatgtcagaggac
ctaacagactacttaaaagaaatcggaattaaagtccagtaccttcactcggaggtcaaa
acgttagaacggattgagatcattcgagaacttcgtttaggaaagtatgatgtgctagta
ggaattaacctattacgggaagggcttgatattccagaggtttcactggtaacgatacta
gacgcggataaagagggattcctgcgttctgaacgctcattaatacagacaatcggacgt
gctgctcgtaacgccaatggacacgtaattatgtatgcagatcgaatgacaaatagcatg
gagcttgctatcagtgaaacgaagcgtcgtcgtttgattcagatggaatataatgaaaag
catgggatcacaccacaaaccattcaaaaggatattcgtgatgttattcgagcaacacat
gcagccgaggagcaagaggagtacaaaccagcaaagaacctaggcaagttaacgaaaaaa
gagaaagaacagctgctgaccgatatggagcaagagatgaaggaagctgcaaaagcgtta
aacttcgaacgagctgcagagcttcgtgatttaatattagagttgaaagcggaaggatga

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